RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 MYCLP1P12525 358 aaPredicted RBP12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 MPSTP25325 297 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 RPS9P46781 194 aaKnown RBP12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 FSTL5Q8N475 847 aaPredicted RBP12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 C2CD4AQ8NCU7 369 aaPredicted RBP12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 SLC26A7Q8TE54 656 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 ECHDC3Q96DC8 303 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 MCCC1Q96RQ3 725 aaPredicted RBP12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 IER2Q9BTL4 223 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 CCDC28BQ9BUN5 200 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 SOHLH2Q9NX45 425 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 ZDHHC2Q9UIJ5 367 aa12.18□□□□□ -0.46
SYNGAP1-207ENST00000628646 AP1G1O43747 822 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 ENO3P13929 434 aaPredicted RBP12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 SRP54P61011 504 aaKnown RBP12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 RACK1P63244 317 aaKnown RBP12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 CATSPER1Q8NEC5 780 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 AARSD1Q9BTE6 412 aaKnown RBP12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 TRIT1Q9H3H1 467 aaKnown RBP12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 ADA2Q9NZK5 511 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 ATXN10Q9UBB4 475 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 IGHV1OR15-9A0A0B4J2B8 117 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 FZD6O60353 706 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 INAVAQ3KP66 663 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 ZNF789Q5FWF6 425 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 RABEPKQ7Z6M1 372 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 ADGRG6Q86SQ4 1221 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 TFGQ92734 400 aaPredicted RBP12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 EZH1Q92800 747 aaPredicted RBP12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 GATA6Q92908 595 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 NXNL1Q96CM4 212 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 LMLNQ96KR4 655 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 ACTR8Q9H981 624 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 H3BNX3 289 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 SH3BP5O60239 455 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 DLX3O60479 287 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 PRDX6P30041 224 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 GRK3P35626 688 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 FBXO48Q5FWF7 155 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 PARGQ86W56 976 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 CPSF7Q8N684 471 aaKnown RBP12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 KYQ8NBH2 561 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 YIPF2Q9BWQ6 316 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 ATG10Q9H0Y0 220 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 SUFUQ9UMX1 484 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 TXNDC9O14530 226 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 NPHS1O60500 1241 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 VPS4BO75351 444 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 AK4P27144 223 aaPredicted RBP12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 SLC26A3P40879 764 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 KLF10Q13118 480 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 NFATC4Q14934 902 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 ACAP2Q15057 778 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 HM13Q8TCT9 377 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 MAELQ96JY0 434 aaKnown RBP12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 PPP1R36Q96LQ0 422 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 CCDC3Q9BQI4 270 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 TNFRSF12AQ9NP84 129 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 IGSF5Q9NSI5 407 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 ZSCAN32Q9NX65 697 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 EBF1Q9UH73 591 aa12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 URB1O60287 2271 aaKnown RBP12.17□□□□□ -0.46
SYNGAP1-207ENST00000628646 MGAT4DA6NG13 374 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 METTL12A8MUP2 240 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 S1PR4O95977 384 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 BCKDHBP21953 392 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 NFE2L1Q14494 772 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 ARL13AQ5H913 290 aaPredicted RBP12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 SH2D4BQ5SQS7 431 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 KLHL35Q6PF15 583 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 PHC3Q8NDX5 983 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 GID8Q9NWU2 228 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 C2orf42Q9NWW7 574 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 A0A1W2PPC4 97 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 TLR4O00206 839 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 UBDO15205 165 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 KATNA1O75449 491 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 RPIAP49247 311 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 CTSCP53634 463 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 GAS6Q14393 721 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 HIST2H2ACQ16777 129 aaPredicted RBP12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 HIST2H2AA3Q6FI13 130 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 CENPKQ9BS16 269 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 ARRDC1-AS1Q9H2J1 176 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 ANKRD36A6QL64 1941 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 ANGPT2O15123 496 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 AP2A2O94973 939 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 ZNF8P17098 575 aaPredicted RBP12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 NUDT2P50583 147 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 MTTPP55157 894 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 TSNQ15631 228 aaKnown RBP12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 OR52E8Q6IFG1 317 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 PTGR2Q8N8N7 351 aaPredicted RBP12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 HMGCLL1Q8TB92 370 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 ATL1Q8WXF7 558 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 RAD51AP1Q96B01 352 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 CCDC124Q96CT7 223 aaKnown RBP12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 WDR55Q9H6Y2 383 aaPredicted RBP12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 AKAP7Q9P0M2 348 aaPredicted RBP12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 OPTCQ9UBM4 332 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms