RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 OR52E6Q96RD3 313 aa9.4□□□□□ -0.9
IGHV3-54-201ENST00000622166 HBEGFQ99075 208 aa9.4□□□□□ -0.9
IGHV3-54-201ENST00000622166 HERC2P3Q9BVR0 1158 aa9.4□□□□□ -0.9
IGHV3-54-201ENST00000622166 AMBRA1Q9C0C7 1298 aa9.4□□□□□ -0.9
IGHV3-54-201ENST00000622166 GABARAPL1Q9H0R8 117 aa9.4□□□□□ -0.9
IGHV3-54-201ENST00000622166 IKZF5Q9H5V7 419 aa9.4□□□□□ -0.9
IGHV3-54-201ENST00000622166 ATP13A3Q9H7F0 1226 aa9.4□□□□□ -0.9
IGHV3-54-201ENST00000622166 KAT8Q9H7Z6 458 aaKnown RBP9.4□□□□□ -0.9
IGHV3-54-201ENST00000622166 SMURF2Q9HAU4 748 aa9.4□□□□□ -0.9
IGHV3-54-201ENST00000622166 SERHLQ9NQF3 203 aa9.4□□□□□ -0.9
IGHV3-54-201ENST00000622166 FARSBQ9NSD9 589 aaKnown RBP9.4□□□□□ -0.9
IGHV3-54-201ENST00000622166 ABCB8Q9NUT2 735 aa9.4□□□□□ -0.9
IGHV3-54-201ENST00000622166 TSR3Q9UJK0 312 aaKnown RBP9.4□□□□□ -0.9
IGHV3-54-201ENST00000622166 MAFFQ9ULX9 164 aa9.4□□□□□ -0.9
IGHV3-54-201ENST00000622166 DENND4CQ5VZ89 1909 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 A0A1W2PPW3 197 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 AREL1O15033 823 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 SMAD6O43541 496 aaKnown RBP9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 NUAK1O60285 661 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 ZNF821O75541 412 aaPredicted RBP9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 IGSF6O95976 241 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 SOD2P04179 222 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 C8GP07360 202 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 ITGAMP11215 1152 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 PCNAP12004 261 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 MATN1P21941 496 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 MAPK1P28482 360 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 PTPN6P29350 595 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 S100A3P33764 101 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 RYKP34925 604 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 DCTP40126 519 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 NSG1P42857 185 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 GDF5P43026 501 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 MAGEA2P43356 314 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 RANBP1P43487 201 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 YAP1P46937 504 aaKnown RBP9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 SLC6A12P48065 614 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 TRPC1P48995 793 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 ALDH7A1P49419 539 aaKnown RBP9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 PHC1P78364 1004 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 ZNF33BQ06732 778 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 ABHD18Q0P651 414 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 NFATC3Q12968 1075 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 KCNAB2Q13303 367 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 CDH18Q13634 790 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 NEDD8Q15843 81 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 TBC1D25Q3MII6 688 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 MPPE1Q53F39 396 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 MPP7Q5T2T1 576 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 KIAA1841Q6NSI8 718 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 CRTC1Q6UUV9 634 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 TPRG1Q6ZUI0 275 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 DNAJB7Q7Z6W7 309 aaPredicted RBP9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 HIPK1Q86Z02 1210 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 RASGRP3Q8IV61 690 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 TCEAL8Q8IYN2 117 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 CHPFQ8IZ52 775 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 SPARTQ8N0X7 666 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 EID3Q8N140 333 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 ELMOD1Q8N336 334 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 TMEM132CQ8N3T6 1108 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 CLDN19Q8N6F1 224 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 KRTCAP2Q8N6L1 136 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 BEND7Q8N7W2 519 aaPredicted RBP9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 L3MBTL4Q8NA19 623 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 GPR26Q8NDV2 337 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 RAB2BQ8WUD1 216 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 TANKQ92844 425 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 MUL1Q969V5 352 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 ZNF566Q969W8 418 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 VOPP1Q96AW1 172 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 TESCQ96BS2 214 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 THAP11Q96EK4 314 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 FAM120BQ96EK7 910 aaKnown RBP9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 PYURFQ96I23 114 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 PHF12Q96QT6 1004 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 SLC22A12Q96S37 553 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 APOL5Q9BWW9 433 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 SLC12A9Q9BXP2 914 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 ACPTQ9BZG2 426 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 TM6SF2Q9BZW4 377 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 NAA50Q9GZZ1 169 aaKnown RBP9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 ING2Q9H160 280 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 RMND5AQ9H871 391 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 FANCEQ9HB96 536 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 IL21Q9HBE4 155 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 ZNF334Q9HCZ1 680 aaPredicted RBP9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 PALMDQ9NP74 551 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 FAIMQ9NVQ4 179 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 BLOC1S6Q9UL45 172 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 SNX6Q9UNH7 406 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 INVSQ9Y283 1065 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 ZNF510Q9Y2H8 683 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 TMED5Q9Y3A6 229 aa9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 MAGED1Q9Y5V3 778 aaPredicted RBP9.39□□□□□ -0.91
IGHV3-54-201ENST00000622166 SCN5AQ14524 2016 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 MICAL3Q7RTP6 2002 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 PRMT3O60678 531 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 PDYNP01213 254 aa9.38□□□□□ -0.91
IGHV3-54-201ENST00000622166 CCDC159P0C7I6 412 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms