RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 TEX261Q6UWH6 196 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 SPNS2Q8IVW8 549 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 DEFB106AQ8N104 65 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 C9orf62Q8N4C0 152 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 C3orf58Q8NDZ4 430 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 ST8SIA2Q92186 375 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 SLC9A6Q92581 669 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 RBPMSQ93062 196 aaKnown RBP7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 MFSD3Q96ES6 412 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 CERS2Q96G23 380 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 SLC30A2Q9BRI3 323 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 SEC22CQ9BRL7 303 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 ITPAQ9BY32 194 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 TRIM54Q9BYV2 358 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 PRDM12Q9H4Q4 367 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 NMRAL1Q9HBL8 299 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 ZBTB20Q9HC78 741 aaPredicted RBP7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 ACOT13Q9NPJ3 140 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 EIF2B3Q9NR50 452 aaKnown RBP7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 ASAH2Q9NR71 780 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 SCN3BQ9NY72 215 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 CCDC167Q9P0B6 97 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 DPP7Q9UHL4 492 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 MAGED2Q9UNF1 606 aaPredicted RBP7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 DTX4Q9Y2E6 619 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 U3KQ87 197 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 A0A0G2JLL6 359 aaPredicted RBP7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 RPS10-NUDT3A0A1W2PQS6 291 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 FAM72CH0Y354 149 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 KHNYNO15037 678 aaKnown RBP7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 ZNF3P17036 446 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 CPN2P22792 545 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 CHMP24386 653 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 HOXA11P31270 313 aaPredicted RBP7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 CTSKP43235 329 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 RPL34P49207 117 aaKnown RBP7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 POU5F1BQ06416 359 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 CDH17Q12864 832 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 MAB21L1Q13394 359 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 COL28A1Q2UY09 1125 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 ZMAT1Q5H9K5 638 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 MARCH8Q5T0T0 291 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 OTUD3Q5T2D3 398 aaPredicted RBP7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 MPP7Q5T2T1 576 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 FAM72AQ5TYM5 149 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 SULT1C3Q6IMI6 304 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 FAM72DQ6L9T8 149 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 LIPIQ6XZB0 460 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 GPRIN3Q6ZVF9 776 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 HTR3DQ70Z44 454 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 PRRT2Q7Z6L0 340 aaPredicted RBP7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 RBM23Q86U06 439 aaKnown RBP7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 FAM72BQ86X60 149 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 RASAL3Q86YV0 1011 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 FAM9CQ8IZT9 166 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 OR8H3Q8N146 312 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 OR8H2Q8N162 312 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 SVOPLQ8N434 492 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 GDPD1Q8N9F7 314 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 ZNF680Q8NEM1 530 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 RNF139Q8WU17 664 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 ZNF669Q96BR6 464 aaPredicted RBP7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 SLC47A1Q96FL8 570 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 ZSWIM3Q96MP5 696 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 TRNT1Q96Q11 434 aaKnown RBP7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 RBM4BQ9BQ04 359 aaKnown RBP7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 NAT9Q9BTE0 207 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 RBM4Q9BWF3 364 aaKnown RBP7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 SLC19A3Q9BZV2 496 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 NXF3Q9H4D5 531 aaKnown RBP7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 RNF121Q9H920 327 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 MEAF6Q9HAF1 191 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 HPF1Q9NWY4 346 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 PTTG3PQ9NZH4 202 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 EGFL7Q9UHF1 273 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 C3orf18Q9UK00 162 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 PNMA8BQ9ULN7 279 aaPredicted RBP7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 RNF112Q9ULX5 631 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 GINS2Q9Y248 185 aa7.35□□□□□ -1.23
TRIM49B-202ENST00000622138 A0A075B6Q4 140 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 ZCWPW2A0A1B0GU75 182 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 PQLC2LA1A4F0 135 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 PTGES3LE9PB15 166 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 UPK1AO00322 258 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 CLDN5O00501 218 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 ABCD4O14678 606 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 GNB5O14775 395 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 SLC16A6O15403 523 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 RGS10O43665 173 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 BEST1O76090 585 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 CELF2O95319 508 aaKnown RBP7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 MT-ND2P03891 347 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 ITGAMP11215 1152 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 SLC2A4P14672 509 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 IGFBP6P24592 240 aaPredicted RBP7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 CD6P30203 668 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 SPRP35270 261 aaPredicted RBP7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 ARL4AP40617 200 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 MAP2K4P45985 399 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 NDUFV1P49821 464 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms