RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 GSCP56915 257 aaPredicted RBP7.05□□□□□ -1.28
COLCA1-205ENST00000620864 CAPN13Q6MZZ7 669 aaPredicted RBP7.05□□□□□ -1.28
COLCA1-205ENST00000620864 ARSKQ6UWY0 536 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 SLC44A1Q8WWI5 657 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 KLHL15Q96M94 604 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 ADAM2Q99965 735 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 CORO1BQ9BR76 489 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 SNTG1Q9NSN8 517 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 FAM86C1Q9NVL1 165 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 TLR6Q9Y2C9 796 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 NME7Q9Y5B8 376 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 ROBO1Q9Y6N7 1651 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 DAPL1A0PJW8 107 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 FCER2P06734 321 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 DNAJB1P25685 340 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 ATAT1Q5SQI0 421 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 REP15Q6BDI9 236 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF410Q86VK4 478 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 SPPL2CQ8IUH8 684 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 CXorf40AQ8TE69 158 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 SLC7A6OSQ96CW6 309 aaPredicted RBP7.05□□□□□ -1.28
COLCA1-205ENST00000620864 UQCC2Q9BRT2 126 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 ZYG11BQ9C0D3 744 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 HCN3Q9P1Z3 774 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 TBC1D14Q9P2M4 693 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 PHF24Q9UPV7 400 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 PGLSO95336 258 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 NPPAP01160 153 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 TGFB3P10600 412 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF20P17024 532 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 PRKACBP22694 351 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 DNAJA1P31689 397 aaKnown RBP7.05□□□□□ -1.28
COLCA1-205ENST00000620864 CSTF2P33240 577 aaKnown RBP eCLIP7.05□□□□□ -1.28
COLCA1-205ENST00000620864 MAP3K8P41279 467 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 CDH13P55290 713 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 NKX6-1P78426 367 aaPredicted RBP7.05□□□□□ -1.28
COLCA1-205ENST00000620864 SEC23AQ15436 765 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 PUS10Q3MIT2 529 aaKnown RBP7.05□□□□□ -1.28
COLCA1-205ENST00000620864 AKR1C8PQ5T2L2 129 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 CERS6Q6ZMG9 384 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 SV2AQ7L0J3 742 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 SLC22A16Q86VW1 577 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 ZFP3Q96NJ6 502 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 MAPKAP1Q9BPZ7 522 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 SYT15Q9BQS2 421 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 CCDC32Q9BV29 185 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 HHATLQ9HCP6 504 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 GTF2IRD1Q9UHL9 959 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF510Q9Y2H8 683 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 A0A1W2PRQ8 180 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 PRKYO43930 277 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 ATG12O94817 140 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 SLC16A8O95907 504 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 SLC18A1P54219 525 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 FOXK2Q01167 660 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 BCL2A1Q16548 175 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 TIGD2Q4W5G0 525 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF283Q8N7M2 679 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 ASB9Q96DX5 294 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 MYO19Q96H55 970 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.04□□□□□ -1.28
COLCA1-205ENST00000620864 ASB8Q9H765 288 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 EGFL7Q9UHF1 273 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 ARL5AQ9Y689 179 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 MT-ND2P03891 347 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 GRK6P43250 576 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 EEFSECP57772 596 aaKnown RBP7.04□□□□□ -1.28
COLCA1-205ENST00000620864 POM121L1PQ3SYA9 428 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 WDR53Q7Z5U6 358 aaPredicted RBP7.04□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF565Q8N9K5 539 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 LPGAT1Q92604 370 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 MYOCQ99972 504 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 HCN2Q9UL51 889 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 NOP16Q9Y3C1 178 aaKnown RBP7.04□□□□□ -1.28
COLCA1-205ENST00000620864 LYPLA1O75608 230 aaPredicted RBP7.04□□□□□ -1.28
COLCA1-205ENST00000620864 AKAP3O75969 853 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 CD44P16070 742 aaKnown RBP7.04□□□□□ -1.28
COLCA1-205ENST00000620864 HK1P19367 917 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 GLP1RP43220 463 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 ADIGQ0VDE8 80 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 MAPK14Q16539 360 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 BTBD16Q32M84 506 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 TRAPPC5Q8IUR0 188 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 TAS1R2Q8TE23 839 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 SECISBP2Q96T21 854 aaKnown RBP7.04□□□□□ -1.28
COLCA1-205ENST00000620864 PXMP2Q9NR77 195 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF446Q9NWS9 450 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 SIX4Q9UIU6 781 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 VWA7Q9Y334 891 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 SNX10Q9Y5X0 201 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 A0A087X0B3 334 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 ATG13O75143 517 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 CRTAPO75718 401 aaPredicted RBP7.04□□□□□ -1.28
COLCA1-205ENST00000620864 IL1R1P14778 569 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 TAL1P17542 331 aaPredicted RBP7.04□□□□□ -1.28
COLCA1-205ENST00000620864 ACVR2AP27037 513 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 DAG1Q14118 895 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 XKR4Q5GH76 650 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 NUP54Q7Z3B4 507 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 ATAD1Q8NBU5 361 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms