RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 ASMTP46597 345 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 MAP2K3P46734 347 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 CARD16Q5EG05 197 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 MPP7Q5T2T1 576 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 CES5AQ6NT32 575 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 IL20RBQ6UXL0 311 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 GPR151Q8TDV0 419 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 DENND1AQ8TEH3 1009 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 SHISA4Q96DD7 197 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 CPXM1Q96SM3 734 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 SLCO3A1Q9UIG8 710 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ATXN7L1Q9ULK2 861 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 CA5BQ9Y2D0 317 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 STATHP02808 62 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 CCR1P32246 355 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 GNASQ5JWF2 1037 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 KIAA1211LQ6NV74 962 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TMED4Q7Z7H5 227 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 CFAP206Q8IYR0 622 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ANKFN1Q8N957 763 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 GPR152Q8TDT2 470 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TAS2R16Q9NYV7 291 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 FLRT1Q9NZU1 646 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 MED11Q9P086 117 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 MEIOCA2RUB1 952 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TMEM88BA6NKF7 163 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 MSI1O43347 362 aaKnown RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 PEPDP12955 493 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 DRD5P21918 477 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 SLC6A2P23975 617 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 SHMT2P34897 504 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ETV1P50549 477 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 RAB15P59190 212 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 DEFB106AQ8N104 65 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TBC1D19Q8N5T2 526 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 HTATIP2Q9BUP3 242 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TRPV4Q9HBA0 871 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 CCNB1IP1Q9NPC3 277 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 WASH6PQ9NQA3 447 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TMEM39AQ9NV64 488 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ZFYVE16Q7Z3T8 1539 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 PCDHGA12O60330 932 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 HLA-DQA2P01906 255 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 MAPTP10636 758 aaKnown RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TSHRP16473 764 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ATAT1Q5SQI0 421 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 PGM2L1Q6PCE3 622 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 C16orf59Q7L2K0 433 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 SIDT2Q8NBJ9 832 aaKnown RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 OR5T1Q8NG75 326 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ELF4Q99607 663 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TBC1D30Q9Y2I9 924 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 GRIP1Q9Y3R0 1128 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 LOC102723532A0A0G2JNH3 316 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 APEHP13798 732 aaKnown RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 PRKCHP24723 683 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 DEFA6Q01524 100 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 MC2RQ01718 297 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 GPR19Q15760 415 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ZNF551Q7Z340 670 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 GSKIPQ9P0R6 139 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 MAGEL2Q9UJ55 1249 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 AQP12BA6NM10 295 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TLL1O43897 1013 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ODC1P11926 461 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 EIF2DP41214 584 aaKnown RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 LRIT3Q3SXY7 679 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 SLC25A25Q6KCM7 469 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 FAM198BQ6UWH4 519 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ZNF730Q6ZMV8 503 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 SPARTQ8N0X7 666 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 CPA6Q8N4T0 437 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 PPP1R14AQ96A00 147 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 RETREG1Q9H6L5 497 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 GPN1Q9HCN4 374 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ERVK-19Q9WJR5 959 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 AP3M1Q9Y2T2 418 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 HRH3Q9Y5N1 445 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TCAF2A6NFQ2 919 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 MDM4O15151 490 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TNFSF12O43508 249 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TLR5O60602 858 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 SULT1C4O75897 302 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ANXA9O76027 345 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 RLN2P04090 185 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 CTPS1P17812 591 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 CA5AP35218 305 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 POLR2IP36954 125 aaKnown RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 RGS4P49798 205 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 PSMD4P55036 377 aaKnown RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 MC1RQ01726 317 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 CNTN1Q12860 1018 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TEX44Q53QW1 395 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 C7orf34Q96L11 122 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 RIPOR3Q96MK2 946 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ZNF518BQ9C0D4 1074 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 POPDC2Q9HBU9 364 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 PAK6Q9NQU5 681 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 C14orf105Q9NVL8 296 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms