RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 GID8Q9NWU2 228 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 ATXN10Q9UBB4 475 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 KCNE1BA0A087WTH5 132 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 ARNTLO00327 626 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 EEDO75530 441 aaKnown RBP16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 RSL1D1O76021 490 aaKnown RBP16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 PDYNP01213 254 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 KRT6AP02538 564 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 KRT6BP04259 564 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 DRD3P35462 400 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 KRT6CP48668 564 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 NFYCQ13952 458 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 BCL7AQ4VC05 210 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 SPATA24Q86W54 205 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 ZFAND4Q86XD8 727 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 MINDY1Q8N5J2 469 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 AADATQ8N5Z0 425 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 PLA2G15Q8NCC3 412 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 TRIM8Q9BZR9 551 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 EPHX3Q9H6B9 360 aa16.9■□□□□ 0.3
PCDHGC3-205ENST00000617641 ANKRD28O15084 1053 aa16.89■□□□□ 0.29
PCDHGC3-205ENST00000617641 DNAJA2O60884 412 aa16.89■□□□□ 0.29
PCDHGC3-205ENST00000617641 CATP04040 527 aaKnown RBP16.89■□□□□ 0.29
PCDHGC3-205ENST00000617641 ATP6V1C1P21283 382 aa16.89■□□□□ 0.29
PCDHGC3-205ENST00000617641 CASP2P42575 452 aa16.89■□□□□ 0.29
PCDHGC3-205ENST00000617641 PRKG2Q13237 762 aa16.89■□□□□ 0.29
PCDHGC3-205ENST00000617641 TLR1Q15399 786 aa16.89■□□□□ 0.29
PCDHGC3-205ENST00000617641 FAM46CQ5VWP2 391 aa16.89■□□□□ 0.29
PCDHGC3-205ENST00000617641 CFAP206Q8IYR0 622 aa16.89■□□□□ 0.29
PCDHGC3-205ENST00000617641 RAB7BQ96AH8 199 aa16.89■□□□□ 0.29
PCDHGC3-205ENST00000617641 RSRC1Q96IZ7 334 aaKnown RBP16.89■□□□□ 0.29
PCDHGC3-205ENST00000617641 ACPTQ9BZG2 426 aa16.89■□□□□ 0.29
PCDHGC3-205ENST00000617641 LRTM1Q9HBL6 345 aa16.89■□□□□ 0.29
PCDHGC3-205ENST00000617641 H3BM21 787 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 SEC22BO75396 215 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 GNPDA1P46926 289 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 NEK2P51955 445 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 SEC13P55735 322 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 LRRC36Q1X8D7 754 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 MAP7D1Q3KQU3 841 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 PLA2G4EQ3MJ16 856 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 GGTA1PQ4G0N0 100 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 C6orf10Q5SRN2 563 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 LPCAT4Q643R3 524 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 PRMT9Q6P2P2 845 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 CRTC3Q6UUV7 619 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 ZNF547Q8IVP9 402 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 SLC15A3Q8IY34 581 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 ZNF513Q8N8E2 541 aaPredicted RBP16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 SELENOMQ8WWX9 145 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 TRIM39Q9HCM9 518 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 CMTM6Q9NX76 183 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 STOX2Q9P2F5 926 aaPredicted RBP16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 ABCD2Q9UBJ2 740 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 LEF1Q9UJU2 399 aaPredicted RBP16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 PSMD13Q9UNM6 376 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 ZNF8P17098 575 aaPredicted RBP16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 SLC6A2P23975 617 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 HALP42357 657 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 TAS2R38P59533 333 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 GTF2H3Q13889 308 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 PTGR1Q14914 329 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 CST6Q15828 149 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 L3MBTL4Q8NA19 623 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 PKP4Q99569 1192 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 ELOVL6Q9H5J4 265 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 INTS7Q9NVH2 962 aaKnown RBP16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 SLAMF8Q9P0V8 285 aa16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 EIF3LQ9Y262 564 aaKnown RBP16.88■□□□□ 0.29
PCDHGC3-205ENST00000617641 IGLON5A6NGN9 336 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 ACADSP16219 412 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 TIE1P35590 1138 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 GALK1P51570 392 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 CHIT1Q13231 466 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 NAE1Q13564 534 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 AGBL4Q5VU57 503 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 ZFP1Q6P2D0 407 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 SLC2A7Q6PXP3 512 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 AGTRAPQ6RW13 159 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 XKR5Q6UX68 686 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 IZUMO2Q6UXV1 221 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 NUDT18Q6ZVK8 323 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 THOC6Q86W42 341 aaKnown RBP16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 LIX1Q8N485 282 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 DNAJB14Q8TBM8 379 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 MED8Q96G25 268 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 CCDC138Q96M89 665 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 FOPNLQ96NB1 174 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 ZNF184Q99676 751 aaPredicted RBP16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 RSPH9Q9H1X1 276 aaPredicted RBP16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 TMEM45AQ9NWC5 275 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 SERGEFQ9UGK8 458 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 SNX6Q9UNH7 406 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 TMEM98Q9Y2Y6 226 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 PCYT1BQ9Y5K3 369 aaPredicted RBP16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 NPC1O15118 1278 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 SLC16A8O95907 504 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 PCCBP05166 539 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 PEX2P28328 305 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms