RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 RESP18Q5W5W9 173 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 C22orf39Q6P5X5 142 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 MED25Q71SY5 747 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 OR4K1Q8NGD4 311 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 OR52J3Q8NH60 311 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 NPLOC4Q8TAT6 608 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 PMEPA1Q969W9 287 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 SPATA13Q96N96 652 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 NOD2Q9HC29 1040 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 SACM1LQ9NTJ5 587 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 RYDENQ9NUL5 291 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 WNT6Q9Y6F9 365 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 F3P13726 295 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 OAS2P29728 719 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 BRCC3P46736 316 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 CSNK2A1P68400 391 aaPredicted RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 SCARA3Q6AZY7 606 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 CNTD1Q8N815 330 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 VPS35Q96QK1 796 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 TAAR9Q96RI9 348 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 G6PC3Q9BUM1 346 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 SHCBP1LQ9BZQ2 653 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 TRIM31Q9BZY9 425 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 Q9N2J8 555 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 SNX14Q9Y5W7 946 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 CDX4O14627 284 aaPredicted RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 SMPD2O60906 423 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 RPLP0P05388 317 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 DDR2Q16832 855 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 BTBD16Q32M84 506 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 TRMT10CQ7L0Y3 403 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 ADGRD2Q7Z7M1 963 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 VSIG1Q86XK7 387 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 CFAP206Q8IYR0 622 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 TRPV1Q8NER1 839 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 EDEM1Q92611 657 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 POP5Q969H6 163 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 RNFT2Q96EX2 444 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 APOOQ9BUR5 198 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 NPLQ9BXD5 320 aaPredicted RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 TDRD1Q9BXT4 1180 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 CLMPQ9H6B4 373 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 SEC14L3Q9UDX4 400 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 CAPN11Q9UMQ6 739 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 A0A1W2PP55 124 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 RAD1O60671 282 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 C8GP07360 202 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 ITGA2BP08514 1039 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 PXNP49023 591 aaPredicted RBP3.28□□□□□ -1.88
LPP-220ENST00000617246 PRKAA2P54646 552 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 MTM1Q13496 603 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 ERMARDQ5T6L9 678 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 UNC5DQ6UXZ4 953 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 FKBP9P1Q75LS8 142 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 MTDHQ86UE4 582 aaKnown RBP3.28□□□□□ -1.88
LPP-220ENST00000617246 C3orf20Q8ND61 904 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 EAF2Q96CJ1 260 aaPredicted RBP3.28□□□□□ -1.88
LPP-220ENST00000617246 CFHR5Q9BXR6 569 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 FAM83DQ9H4H8 585 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 HAUS4Q9H6D7 363 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 ARFGAP3Q9NP61 516 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 MRPL42Q9Y6G3 142 aaKnown RBP3.28□□□□□ -1.88
LPP-220ENST00000617246 RBP1P09455 135 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 CCDC166P0CW27 439 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 ENGP17813 658 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 GSSP48637 474 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 FRMPD2BQ6IN97 320 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 OR2AP1Q8NGE2 309 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 DIRC2Q96SL1 478 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 ETNK2Q9NVF9 386 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 PCDHA13Q9Y5I0 950 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 HAS3O00219 553 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 DSG1Q02413 1049 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 PRKD1Q15139 912 aaPredicted RBP3.28□□□□□ -1.88
LPP-220ENST00000617246 THOC7Q6I9Y2 204 aaKnown RBP3.28□□□□□ -1.88
LPP-220ENST00000617246 DET1Q7L5Y6 550 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 TMPRSS11BQ86T26 416 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 CDR2LQ86X02 465 aaPredicted RBP3.28□□□□□ -1.88
LPP-220ENST00000617246 GJC3Q8NFK1 279 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 THAP4Q8WY91 577 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 ALG3Q92685 438 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 TOE1Q96GM8 510 aaKnown RBP3.28□□□□□ -1.88
LPP-220ENST00000617246 WASH6PQ9NQA3 447 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 AMACRQ9UHK6 382 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 SLC27A5Q9Y2P5 690 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 LOXL2Q9Y4K0 774 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 LACTBL1A8MY62 500 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 ACTL6BO94805 426 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 PROS1P07225 676 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 LINGO3P0C6S8 592 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 NR2C2P49116 596 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 MAPK11Q15759 364 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 CLPPQ16740 277 aaPredicted RBP3.28□□□□□ -1.88
LPP-220ENST00000617246 ZC3H18Q86VM9 953 aaKnown RBP3.28□□□□□ -1.88
LPP-220ENST00000617246 FAM228AQ86W67 206 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 PIAS4Q8N2W9 510 aaPredicted RBP3.28□□□□□ -1.88
LPP-220ENST00000617246 GPR137CQ8N3F9 429 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 SYT2Q8N9I0 419 aaPredicted RBP3.28□□□□□ -1.88
LPP-220ENST00000617246 ACER1Q8TDN7 264 aa3.28□□□□□ -1.88
LPP-220ENST00000617246 ZBTB9Q96C00 473 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms