RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 CCNI2Q6ZMN8 369 aaPredicted RBP2.55□□□□□ -2
HMGB1P24-202ENST00000615653 GSTA5Q7RTV2 222 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 TADA2BQ86TJ2 420 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 SPATA24Q86W54 205 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 ZC3HC1Q86WB0 502 aaKnown RBP2.55□□□□□ -2
HMGB1P24-202ENST00000615653 UNC5CLQ8IV45 518 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 LINC00346Q8IVM7 164 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 SCYL3Q8IZE3 742 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 CLYBLQ8N0X4 340 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 PARP16Q8N5Y8 322 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 LPCAT1Q8NF37 534 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 TEKT4Q8WW24 435 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 MOAP1Q96BY2 351 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 FBXL8Q96CD0 374 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 KLHL29Q96CT2 875 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 TPD52L3Q96J77 140 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 UHRF2Q96PU4 802 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 PIP5K1AQ99755 562 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 SSX3Q99909 188 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 CCDC77Q9BR77 488 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 TUBB2BQ9BVA1 445 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 CARD6Q9BX69 1037 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 NFKBIZQ9BYH8 718 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 MTMR12Q9C0I1 747 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 SLC7A5P2Q9GIP4 190 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 USP44Q9H0E7 712 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 CARD9Q9H257 536 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 PNNQ9H307 717 aaKnown RBP2.55□□□□□ -2
HMGB1P24-202ENST00000615653 ZNF644Q9H582 1327 aaPredicted RBP2.55□□□□□ -2
HMGB1P24-202ENST00000615653 SLC32A1Q9H598 525 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 VCPKMTQ9H867 229 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 LRRC40Q9H9A6 602 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 CENPJQ9HC77 1338 aaPredicted RBP2.55□□□□□ -2
HMGB1P24-202ENST00000615653 LTB4R2Q9NPC1 389 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 PPANQ9NQ55 473 aaKnown RBP2.55□□□□□ -2
HMGB1P24-202ENST00000615653 FAM114A2Q9NRY5 505 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 GLRX2Q9NS18 164 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 CENPMQ9NSP4 180 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 RRP7BPQ9NSQ0 103 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 GDAP2Q9NXN4 497 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 PSD3Q9NYI0 1048 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 IL1RAPL1Q9NZN1 696 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 TMOD2Q9NZR1 351 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 KIAA1456Q9P272 454 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 FAM153AQ9UHL3 310 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 BAIAP2L1Q9UHR4 511 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 PSME2Q9UL46 239 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 CCPG1Q9ULG6 757 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 CLEC4AQ9UMR7 237 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 SNX9Q9Y5X1 595 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 SPACA6W5XKT8 324 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 KIF7Q2M1P5 1343 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 NPHP3Q7Z494 1330 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 hDV102S1A0JD36 115 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 FRMD3A2A2Y4 597 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 FAM47DPA6NHR8 397 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 LRRC72A6NJI9 287 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 CDRT15L2A8MXV6 281 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 E9PBE3 544 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 H0Y8G0 127 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 TULP2O00295 520 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 ATP2A1O14983 1001 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 NUDT21O43809 227 aaKnown RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 ZIC3O60481 467 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 PSMD10O75832 226 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 FLOT1O75955 427 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 RHOBTB1O94844 696 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 AKR7A3O95154 331 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 SIX3O95343 332 aaPredicted RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 PENKP01210 267 aaPredicted RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 S100A6P06703 90 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 MMP2P08253 660 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 VIMP08670 466 aaKnown RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 ZNF853P0CG23 659 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 IRF1P10914 325 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 SKILP12757 684 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 DDX5P17844 614 aaKnown RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 AZU1P20160 251 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 GALP22466 123 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 GLRA2P23416 452 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 JAK1P23458 1154 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 PTPN3P26045 913 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 CTNNA2P26232 953 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 PSMA5P28066 241 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 SSTR2P30874 369 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 CTNNB1P35222 781 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 HSD17B2P37059 387 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 NUP62P37198 522 aaPredicted RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 CCT6AP40227 531 aaKnown RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 MDH1P40925 334 aaKnown RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 PRKCIP41743 596 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 GABRB2P47870 512 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 FASLGP48023 281 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 CXCR3P49682 368 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 KHKP50053 298 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 BLVRAP53004 296 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 ATP5IP56385 69 aaPredicted RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 GFPT1Q06210 699 aaPredicted RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 ELP6Q0PNE2 266 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms