RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 CES1P23141 567 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 RPL10P27635 214 aaKnown RBP12.81□□□□□ -0.36
FOXN3-219ENST00000615335 MSX2P35548 267 aaPredicted RBP12.81□□□□□ -0.36
FOXN3-219ENST00000615335 MAXP61244 160 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 SMAD2Q15796 467 aaKnown RBP12.81□□□□□ -0.36
FOXN3-219ENST00000615335 AAK1Q2M2I8 961 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 LEXMQ3ZCV2 418 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 FUT11Q495W5 492 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 TSTD2Q5T7W7 516 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 RETSATQ6NUM9 610 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 ERAP2Q6P179 960 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 FAM122CQ6P4D5 195 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 SPATA6LQ8N4H0 392 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 KDM1BQ8NB78 822 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 OMDQ99983 421 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 BCL7BQ9BQE9 202 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 KCNK12Q9HB15 430 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 GLOD4Q9HC38 313 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 SYTL2Q9HCH5 934 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 ATPIF1Q9UII2 106 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 WBP11Q9Y2W2 641 aaKnown RBP12.81□□□□□ -0.36
FOXN3-219ENST00000615335 MN1Q10571 1320 aaPredicted RBP12.81□□□□□ -0.36
FOXN3-219ENST00000615335 SHOXO15266 292 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 CCNKO75909 580 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 SLC6A11P48066 632 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 ARCN1P48444 511 aaKnown RBP12.81□□□□□ -0.36
FOXN3-219ENST00000615335 KPNA2P52292 529 aaKnown RBP12.81□□□□□ -0.36
FOXN3-219ENST00000615335 PLK1P53350 603 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 GEMP55040 296 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 GALK2Q01415 458 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 TFF2Q03403 129 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 RALGDSQ12967 914 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 LDLRAP1Q5SW96 308 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 CHSY3Q70JA7 882 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 MFSD4AQ8N468 514 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 TEX26Q8N6G2 289 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 RNF148Q8N7C7 305 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 PIK3C3Q8NEB9 887 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 RPL10LQ96L21 214 aaKnown RBP12.81□□□□□ -0.36
FOXN3-219ENST00000615335 CINPQ9BW66 212 aaPredicted RBP12.81□□□□□ -0.36
FOXN3-219ENST00000615335 ATP13A2Q9NQ11 1180 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 DEC1Q9P2X7 70 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 FBXO10Q9UK96 956 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 A0A087X1B8 175 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 STX16-NPEPL1H3BU86 382 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 KCNH1O95259 989 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 MT-CO1P00395 513 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 PAMP19021 973 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 IMPDH1P20839 514 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 GJA4P35212 333 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 DPP6P42658 865 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 SLC1A2P43004 574 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 CTSOP43234 321 aaPredicted RBP12.8□□□□□ -0.36
FOXN3-219ENST00000615335 PSMD8P48556 350 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 AP2S1P53680 142 aaPredicted RBP12.8□□□□□ -0.36
FOXN3-219ENST00000615335 SLC12A2P55011 1212 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 TAS2R39P59534 338 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 MRPS15P82914 257 aaKnown RBP12.8□□□□□ -0.36
FOXN3-219ENST00000615335 KRR1Q13601 381 aaKnown RBP12.8□□□□□ -0.36
FOXN3-219ENST00000615335 TRIM25Q14258 630 aaKnown RBP12.8□□□□□ -0.36
FOXN3-219ENST00000615335 GEN1Q17RS7 908 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 ITPRIPL2Q3MIP1 535 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 DENND5AQ6IQ26 1287 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 PIWIL4Q7Z3Z4 852 aaKnown RBP12.8□□□□□ -0.36
FOXN3-219ENST00000615335 ADIPOR2Q86V24 386 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 ETFBKMTQ8IXQ9 262 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 FAM109AQ8N4B1 249 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 CSGALNACT1Q8TDX6 532 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 SNX19Q92543 992 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 DEPDC7Q96QD5 511 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 NPAS2Q99743 824 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 MRPL57Q9BQC6 102 aaKnown RBP12.8□□□□□ -0.36
FOXN3-219ENST00000615335 ZNF717Q9BY31 904 aaPredicted RBP12.8□□□□□ -0.36
FOXN3-219ENST00000615335 SLC2A6Q9UGQ3 507 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 MIA3Q5JRA6 1907 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 SAC3D1A6NKF1 404 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 TMEM233B4DJY2 109 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 SDHDO14521 159 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 DNAJB5O75953 348 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 CISD3P0C7P0 127 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 ATP5F1P24539 256 aaPredicted RBP12.8□□□□□ -0.36
FOXN3-219ENST00000615335 ARNTP27540 789 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 GAB4Q2WGN9 574 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 INO80DQ53TQ3 878 aaPredicted RBP12.8□□□□□ -0.36
FOXN3-219ENST00000615335 CCNYL2Q5T2Q4 361 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 BROXQ5VW32 411 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 CLYBLQ8N0X4 340 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 TXNDC5Q8NBS9 432 aaKnown RBP12.8□□□□□ -0.36
FOXN3-219ENST00000615335 MAFAQ8NHW3 353 aaPredicted RBP12.8□□□□□ -0.36
FOXN3-219ENST00000615335 FIG4Q92562 907 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 CIPCQ9C0C6 399 aa12.8□□□□□ -0.36
FOXN3-219ENST00000615335 POLR1EQ9GZS1 481 aaKnown RBP12.8□□□□□ -0.36
FOXN3-219ENST00000615335 NOL11Q9H8H0 719 aaKnown RBP12.8□□□□□ -0.36
FOXN3-219ENST00000615335 MRM3Q9HC36 420 aaKnown RBP12.8□□□□□ -0.36
FOXN3-219ENST00000615335 FCF1Q9Y324 198 aaKnown RBP12.8□□□□□ -0.36
FOXN3-219ENST00000615335 TCRBV3S1A0A5B6 114 aa12.79□□□□□ -0.36
FOXN3-219ENST00000615335 TTC24A2A3L6 582 aaPredicted RBP12.79□□□□□ -0.36
FOXN3-219ENST00000615335 K7ERQ8 282 aa12.79□□□□□ -0.36
FOXN3-219ENST00000615335 ARNTLO00327 626 aa12.79□□□□□ -0.36
FOXN3-219ENST00000615335 SOCS2O14508 198 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms