RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 GPR88Q9GZN0 384 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 TESMINQ9Y4I5 508 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 WASF2Q9Y6W5 498 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 TAS2R39P59534 338 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 CRTC2Q53ET0 693 aaPredicted RBP17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 COX18Q8N8Q8 333 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 CNDP2Q96KP4 475 aaKnown RBP17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 FAM129BQ96TA1 746 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 DTLQ9NZJ0 730 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 TRIM3O75382 744 aaPredicted RBP17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 DNAJA1P31689 397 aaKnown RBP17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 SLC1A2P43004 574 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 CLCNKBP51801 687 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 MXD1Q05195 221 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 ZBED5Q49AG3 693 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 SPIN4Q56A73 249 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 ABCG4Q9H172 646 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 FZD8Q9H461 694 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 DUS2Q9NX74 493 aaKnown RBP17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 SPATA7Q9P0W8 599 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 FKBP7Q9Y680 259 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 NCK1P16333 377 aa17.08■□□□□ 0.33
HMGXB3-206ENST00000613459 BLKP51451 505 aa17.08■□□□□ 0.33
HMGXB3-206ENST00000613459 TUBA3CQ13748 450 aa17.08■□□□□ 0.33
HMGXB3-206ENST00000613459 FAM174BQ3ZCQ3 159 aa17.08■□□□□ 0.33
HMGXB3-206ENST00000613459 OGFOD2Q6N063 350 aa17.08■□□□□ 0.33
HMGXB3-206ENST00000613459 TMEM220Q6QAJ8 160 aa17.08■□□□□ 0.33
HMGXB3-206ENST00000613459 LINGO2Q7L985 606 aa17.08■□□□□ 0.33
HMGXB3-206ENST00000613459 AVL9Q8NBF6 648 aa17.08■□□□□ 0.33
HMGXB3-206ENST00000613459 OR7D4Q8NG98 312 aa17.08■□□□□ 0.33
HMGXB3-206ENST00000613459 SCGB3A2Q96PL1 93 aa17.08■□□□□ 0.33
HMGXB3-206ENST00000613459 CDH7Q9ULB5 785 aa17.08■□□□□ 0.33
HMGXB3-206ENST00000613459 AKAP8O43823 692 aaKnown RBP17.08■□□□□ 0.33
HMGXB3-206ENST00000613459 ACSL1P33121 698 aa17.08■□□□□ 0.33
HMGXB3-206ENST00000613459 ASPAP45381 313 aa17.08■□□□□ 0.33
HMGXB3-206ENST00000613459 MASP1P48740 699 aa17.08■□□□□ 0.33
HMGXB3-206ENST00000613459 PRMT2P55345 433 aa17.08■□□□□ 0.33
HMGXB3-206ENST00000613459 PPIGQ13427 754 aaKnown RBP eCLIP17.08■□□□□ 0.333e-7■■■■□ 21
HMGXB3-206ENST00000613459 ATAT1Q5SQI0 421 aa17.08■□□□□ 0.33
HMGXB3-206ENST00000613459 IDNKQ5T6J7 187 aa17.08■□□□□ 0.33
HMGXB3-206ENST00000613459 SLC35B2Q8TB61 432 aa17.08■□□□□ 0.33
HMGXB3-206ENST00000613459 ZSWIM3Q96MP5 696 aa17.08■□□□□ 0.33
HMGXB3-206ENST00000613459 POFUT2Q9Y2G5 429 aa17.08■□□□□ 0.33
HMGXB3-206ENST00000613459 OR2AG2A6NM03 316 aa17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 hCG_2039718K7EN88 272 aa17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 ITGA10O75578 1167 aa17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 CD48P09326 243 aa17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 PSKH1P11801 424 aa17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 PDHA2P29803 388 aa17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 TIGD6Q17RP2 521 aa17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 KLHDC10Q6PID8 442 aa17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 NUDT13Q86X67 352 aa17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 OR2L5Q8NG80 312 aa17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 GTPBP3Q969Y2 492 aaKnown RBP17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 LMLNQ96KR4 655 aa17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 C12orf66Q96MD2 445 aa17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 MRPS17Q9Y2R5 130 aaKnown RBP17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 ARL5CA6NH57 179 aa17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 RBM34P42696 430 aaKnown RBP17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 GBX2P52951 348 aaPredicted RBP17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 ZNF615Q8N8J6 731 aa17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 TFAP2BQ92481 460 aa17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 DMRTB1Q96MA1 342 aa17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 CEP295NLQ96MC4 621 aa17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 MARCH7Q9H992 704 aa17.08■□□□□ 0.32
HMGXB3-206ENST00000613459 PRKD3O94806 890 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 PGLSO95336 258 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 RLN2P04090 185 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 CPN2P22792 545 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 ATXN1P54253 815 aaKnown RBP17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 DCDC1P59894 354 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 HSPB3Q12988 150 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 ZNF234Q14588 700 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 ANO7Q6IWH7 933 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 NETO2Q8NC67 525 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 SLAIN1Q8ND83 568 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 TBC1D17Q9HA65 648 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 POLR3BQ9NW08 1133 aaPredicted RBP17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 CYP11A1P05108 521 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 GNALP38405 381 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 ADAM8P78325 824 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 ZNF33AQ06730 810 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 VARS2Q5ST30 1063 aaKnown RBP17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 NAT8LQ8N9F0 302 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 ZNF548Q8NEK5 533 aaPredicted RBP17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 FLT3LGP49771 235 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 CEP68Q76N32 757 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 SPAG16Q8N0X2 631 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 OR5T3Q8NGG3 340 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 SIPA1Q96FS4 1042 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 SNTG1Q9NSN8 517 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 MOCS1Q9NZB8 636 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 KANTRA0A1W2PQU2 76 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 NT5C1B-RDH14C9J2C7 533 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 SLURP2P0DP57 97 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 NR2C1P13056 603 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 MPIP34949 423 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 FAM124AQ86V42 546 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 ZMIZ2Q8NF64 920 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 GEMIN6Q8WXD5 167 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms