RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 PKDREJQ9NTG1 2253 aa22.54■■□□□ 1.2
MMP28-203ENST00000612672 CCDC168Q8NDH2 2452 aa22.53■■□□□ 1.2
MMP28-203ENST00000612672 CFAP99D6REC4 459 aa22.53■■□□□ 1.2
MMP28-203ENST00000612672 GOLGA6L22H0YM25 854 aa22.53■■□□□ 1.2
MMP28-203ENST00000612672 AKR1B10O60218 316 aa22.53■■□□□ 1.2
MMP28-203ENST00000612672 ACADLP28330 430 aa22.53■■□□□ 1.2
MMP28-203ENST00000612672 SLC1A1P43005 524 aa22.53■■□□□ 1.2
MMP28-203ENST00000612672 RPA4Q13156 261 aa22.53■■□□□ 1.2
MMP28-203ENST00000612672 SPARCL1Q14515 664 aa22.53■■□□□ 1.2
MMP28-203ENST00000612672 TFDP3Q5H9I0 405 aa22.53■■□□□ 1.2
MMP28-203ENST00000612672 SHISA6Q6ZSJ9 500 aa22.53■■□□□ 1.2
MMP28-203ENST00000612672 FJX1Q86VR8 437 aa22.53■■□□□ 1.2
MMP28-203ENST00000612672 MCEMP1Q8IX19 187 aa22.53■■□□□ 1.2
MMP28-203ENST00000612672 DNAJB14Q8TBM8 379 aa22.53■■□□□ 1.2
MMP28-203ENST00000612672 CNDP1Q96KN2 507 aa22.53■■□□□ 1.2
MMP28-203ENST00000612672 SLX1AQ9BQ83 275 aa22.53■■□□□ 1.2
MMP28-203ENST00000612672 NF1P21359 2839 aa22.53■■□□□ 1.2
MMP28-203ENST00000612672 HACD1B0YJ81 288 aa22.52■■□□□ 1.2
MMP28-203ENST00000612672 PRSS44E7EML9 344 aa22.52■■□□□ 1.2
MMP28-203ENST00000612672 PSTPIP1O43586 416 aa22.52■■□□□ 1.2
MMP28-203ENST00000612672 KLHL41O60662 606 aa22.52■■□□□ 1.2
MMP28-203ENST00000612672 MMP11P24347 488 aa22.52■■□□□ 1.2
MMP28-203ENST00000612672 SHMT2P34897 504 aa22.52■■□□□ 1.2
MMP28-203ENST00000612672 ZNF169Q14929 603 aaPredicted RBP22.52■■□□□ 1.2
MMP28-203ENST00000612672 DBN1Q16643 649 aa22.52■■□□□ 1.2
MMP28-203ENST00000612672 KIRREL2Q6UWL6 708 aa22.52■■□□□ 1.2
MMP28-203ENST00000612672 HOOK3Q86VS8 718 aa22.52■■□□□ 1.2
MMP28-203ENST00000612672 PARP9Q8IXQ6 854 aa22.52■■□□□ 1.2
MMP28-203ENST00000612672 HEMGNQ9BXL5 484 aa22.52■■□□□ 1.2
MMP28-203ENST00000612672 ANXA9O76027 345 aa22.51■■□□□ 1.19
MMP28-203ENST00000612672 STSP08842 583 aa22.51■■□□□ 1.19
MMP28-203ENST00000612672 MCM3P25205 808 aa22.51■■□□□ 1.19
MMP28-203ENST00000612672 CDC16Q13042 620 aa22.51■■□□□ 1.19
MMP28-203ENST00000612672 BRD3Q15059 726 aa22.51■■□□□ 1.19
MMP28-203ENST00000612672 NKG7Q16617 165 aa22.51■■□□□ 1.19
MMP28-203ENST00000612672 TLDC1Q6P9B6 456 aa22.51■■□□□ 1.19
MMP28-203ENST00000612672 CATSPER1Q8NEC5 780 aa22.51■■□□□ 1.19
MMP28-203ENST00000612672 KRT35Q92764 455 aa22.51■■□□□ 1.19
MMP28-203ENST00000612672 FAM118BQ9BPY3 351 aa22.51■■□□□ 1.19
MMP28-203ENST00000612672 IRAK4Q9NWZ3 460 aa22.51■■□□□ 1.19
MMP28-203ENST00000612672 EURLQ9NYK6 297 aa22.51■■□□□ 1.19
MMP28-203ENST00000612672 CTSFQ9UBX1 484 aa22.51■■□□□ 1.19
MMP28-203ENST00000612672 CDC23Q9UJX2 597 aa22.51■■□□□ 1.19
MMP28-203ENST00000612672 ASF1AQ9Y294 204 aa22.51■■□□□ 1.19
MMP28-203ENST00000612672 TDRKHQ9Y2W6 561 aaKnown RBP22.51■■□□□ 1.19
MMP28-203ENST00000612672 BHMG1C9JSJ3 638 aaPredicted RBP22.5■■□□□ 1.19
MMP28-203ENST00000612672 CRTAMO95727 393 aa22.5■■□□□ 1.19
MMP28-203ENST00000612672 MAGP20916 626 aa22.5■■□□□ 1.19
MMP28-203ENST00000612672 PER3P56645 1201 aa22.5■■□□□ 1.19
MMP28-203ENST00000612672 TCEAL1Q15170 157 aa22.5■■□□□ 1.19
MMP28-203ENST00000612672 TTLL10Q6ZVT0 673 aa22.5■■□□□ 1.19
MMP28-203ENST00000612672 BBS12Q6ZW61 710 aa22.5■■□□□ 1.19
MMP28-203ENST00000612672 CCDC50Q8IVM0 306 aa22.5■■□□□ 1.19
MMP28-203ENST00000612672 KATNAL2Q8IYT4 538 aa22.5■■□□□ 1.19
MMP28-203ENST00000612672 OR8K1Q8NGG5 319 aa22.5■■□□□ 1.19
MMP28-203ENST00000612672 HEXDCQ8WVB3 486 aa22.5■■□□□ 1.19
MMP28-203ENST00000612672 NDC1Q9BTX1 674 aa22.5■■□□□ 1.19
MMP28-203ENST00000612672 SOX17Q9H6I2 414 aaPredicted RBP22.5■■□□□ 1.19
MMP28-203ENST00000612672 NHEJ1Q9H9Q4 299 aaPredicted RBP22.5■■□□□ 1.19
MMP28-203ENST00000612672 PLCL2Q9UPR0 1127 aa22.5■■□□□ 1.19
MMP28-203ENST00000612672 ALG6Q9Y672 507 aa22.5■■□□□ 1.19
MMP28-203ENST00000612672 CPAMD8Q8IZJ3 1885 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 SYCE3A1L190 88 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 H7C0C1 242 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 KLHL18O94889 574 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 CD63P08962 238 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 ALAS2P22557 587 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 ATP5OP48047 213 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 TDGF1P3P51864 188 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 SLC5A12Q1EHB4 618 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 GPR33Q49SQ1 333 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 ANKRD20A2Q5SQ80 823 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 ANKRD20A1Q5TYW2 823 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 AGAP7PQ5VUJ5 663 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 ANKRD20A3Q5VUR7 823 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 LINC00696Q6ZRV3 163 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 OVCH1Q7RTY7 1134 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 METTL27Q8N6F8 245 aaPredicted RBP22.49■■□□□ 1.19
MMP28-203ENST00000612672 LINC01555Q8NAE3 123 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 CCDC110Q8TBZ0 833 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 FKBP10Q96AY3 582 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 AGAP4Q96P64 663 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 TBL1YQ9BQ87 522 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 MENTQ9BUN1 341 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 CIDEBQ9UHD4 219 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 PCNX1Q96RV3 2341 aa22.49■■□□□ 1.19
MMP28-203ENST00000612672 ISM1B1AKI9 464 aa22.48■■□□□ 1.19
MMP28-203ENST00000612672 APOC4-APOC2K7ER74 178 aa22.48■■□□□ 1.19
MMP28-203ENST00000612672 MED26O95402 600 aa22.48■■□□□ 1.19
MMP28-203ENST00000612672 ONECUT2O95948 504 aa22.48■■□□□ 1.19
MMP28-203ENST00000612672 APOC2P02655 101 aa22.48■■□□□ 1.19
MMP28-203ENST00000612672 KCNK10P57789 538 aa22.48■■□□□ 1.19
MMP28-203ENST00000612672 B3GNTL1Q67FW5 361 aaPredicted RBP22.48■■□□□ 1.19
MMP28-203ENST00000612672 ZNF324BQ6AW86 544 aaPredicted RBP22.48■■□□□ 1.19
MMP28-203ENST00000612672 ITPRIPL1Q6GPH6 555 aa22.48■■□□□ 1.19
MMP28-203ENST00000612672 TAS2R42Q7RTR8 314 aa22.48■■□□□ 1.19
MMP28-203ENST00000612672 TBC1D21Q8IYX1 336 aa22.48■■□□□ 1.19
MMP28-203ENST00000612672 OR11G2Q8NGC1 345 aa22.48■■□□□ 1.19
MMP28-203ENST00000612672 OR5K2Q8NHB8 316 aa22.48■■□□□ 1.19
MMP28-203ENST00000612672 VPS37BQ9H9H4 285 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms