RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 CCR5P51681 352 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 TCHHL1Q5QJ38 904 aaPredicted RBP11.97□□□□□ -0.49
CBWD1-220ENST00000612045 CHSY3Q70JA7 882 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 ASRGL1Q7L266 308 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 CHCHD4Q8N4Q1 142 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 SNX31Q8N9S9 440 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 KLHL29Q96CT2 875 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 SLC7A6OSQ96CW6 309 aaPredicted RBP11.97□□□□□ -0.49
CBWD1-220ENST00000612045 CATSPER2Q96P56 530 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 CCT7Q99832 543 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 FGF22Q9HCT0 170 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 DNAJC11Q9NVH1 559 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 WSB2Q9NYS7 404 aaPredicted RBP11.97□□□□□ -0.49
CBWD1-220ENST00000612045 TAGLN3Q9UI15 199 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 G3BP2Q9UN86 482 aaKnown RBP11.97□□□□□ -0.49
CBWD1-220ENST00000612045 PSMD13Q9UNM6 376 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 RNF11Q9Y3C5 154 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 CAPN7Q9Y6W3 813 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 USP34Q70CQ2 3546 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 UBDO15205 165 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 KCNJ13O60928 360 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 VPS4BO75351 444 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 ZNF217O75362 1048 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 GNPDA1P46926 289 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 RASSF2P50749 326 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 KLF10Q13118 480 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 NAE1Q13564 534 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 NFATC4Q14934 902 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 XKR7Q5GH72 579 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 KIAA0895LQ68EN5 471 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 GCNT7Q6ZNI0 430 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 KLHDC8AQ8IYD2 350 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 TMEM145Q8NBT3 493 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 OR9A1PQ8NGU1 263 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 MAGEC3Q8TD91 643 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 TFGQ92734 400 aaPredicted RBP11.97□□□□□ -0.49
CBWD1-220ENST00000612045 MARK4Q96L34 752 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 GPR174Q9BXC1 333 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 TPSD1Q9BZJ3 242 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 LRMDAQ9H2I8 198 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 TBC1D17Q9HA65 648 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 PFDN4Q9NQP4 134 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 INTS7Q9NVH2 962 aaKnown RBP11.97□□□□□ -0.49
CBWD1-220ENST00000612045 TRPS1Q9UHF7 1281 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 POLG2Q9UHN1 485 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 ASF1AQ9Y294 204 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 GPSM3Q9Y4H4 160 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 HS3ST3A1Q9Y663 406 aa11.97□□□□□ -0.49
CBWD1-220ENST00000612045 COPG1Q9Y678 874 aaKnown RBP11.97□□□□□ -0.49
CBWD1-220ENST00000612045 PRSS38A1L453 326 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 IFRD1O00458 451 aaPredicted RBP11.96□□□□□ -0.49
CBWD1-220ENST00000612045 SLC22A2O15244 555 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 CLDN9O95484 217 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 APBB3O95704 486 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 SLC35G4P0C7Q5 338 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 KELP23276 732 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 RPL10P27635 214 aaKnown RBP11.96□□□□□ -0.49
CBWD1-220ENST00000612045 HTR1BP28222 390 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 HMOX2P30519 316 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 CLCNKAP51800 687 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 YPEL5P62699 121 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 NAA25Q14CX7 972 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 TPRG1LQ5T0D9 272 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 CAPRIN2Q6IMN6 1127 aaKnown RBP11.96□□□□□ -0.49
CBWD1-220ENST00000612045 SCIMPQ6UWF3 145 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 ENPP7Q6UWV6 458 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 THOC6Q86W42 341 aaKnown RBP11.96□□□□□ -0.49
CBWD1-220ENST00000612045 KIF2BQ8N4N8 673 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 FRMD1Q8N878 549 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 OR5AR1Q8NGP9 310 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 OR56A3Q8NH54 315 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 ZNF480Q8WV37 535 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 RLN3Q8WXF3 142 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 BIRC7Q96CA5 298 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 TUBGCP3Q96CW5 907 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 MED8Q96G25 268 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 WDR92Q96MX6 357 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 ACTR8Q9H981 624 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 CARS2Q9HA77 564 aaKnown RBP11.96□□□□□ -0.49
CBWD1-220ENST00000612045 THEGQ9P2T0 379 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 KCNK6Q9Y257 313 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 PLEKHM1Q9Y4G2 1056 aa11.96□□□□□ -0.49
CBWD1-220ENST00000612045 IGHV1OR15-9A0A0B4J2B8 117 aa11.95□□□□□ -0.5
CBWD1-220ENST00000612045 PRR19A6NJB7 356 aa11.95□□□□□ -0.5
CBWD1-220ENST00000612045 PRAMEF26H0Y7S4 382 aa11.95□□□□□ -0.5
CBWD1-220ENST00000612045 STK25O00506 426 aa11.95□□□□□ -0.5
CBWD1-220ENST00000612045 PTPN4P29074 926 aa11.95□□□□□ -0.5
CBWD1-220ENST00000612045 ADSLP30566 484 aaPredicted RBP11.95□□□□□ -0.5
CBWD1-220ENST00000612045 HTR6P50406 440 aa11.95□□□□□ -0.5
CBWD1-220ENST00000612045 GRB7Q14451 532 aa11.95□□□□□ -0.5
CBWD1-220ENST00000612045 ABRAXAS2Q15018 415 aa11.95□□□□□ -0.5
CBWD1-220ENST00000612045 GGTA1PQ4G0N0 100 aa11.95□□□□□ -0.5
CBWD1-220ENST00000612045 IL27RAQ6UWB1 636 aa11.95□□□□□ -0.5
CBWD1-220ENST00000612045 MYLK4Q86YV6 388 aaPredicted RBP11.95□□□□□ -0.5
CBWD1-220ENST00000612045 DCUN1D3Q8IWE4 304 aa11.95□□□□□ -0.5
CBWD1-220ENST00000612045 SPEM1Q8N4L4 309 aa11.95□□□□□ -0.5
CBWD1-220ENST00000612045 FAM160A2Q8N612 972 aaPredicted RBP11.95□□□□□ -0.5
CBWD1-220ENST00000612045 PPFIBP2Q8ND30 876 aa11.95□□□□□ -0.5
CBWD1-220ENST00000612045 PHC3Q8NDX5 983 aa11.95□□□□□ -0.5
CBWD1-220ENST00000612045 PJA1Q8NG27 643 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms