RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 IL9RQ01113 521 aa15.53■□□□□ 0.08
CLTCL1-207ENST00000611723 TCEA2Q15560 299 aa15.53■□□□□ 0.08
CLTCL1-207ENST00000611723 METTL2BQ6P1Q9 378 aaKnown RBP15.53■□□□□ 0.08
CLTCL1-207ENST00000611723 AVL9Q8NBF6 648 aa15.53■□□□□ 0.08
CLTCL1-207ENST00000611723 OR5AR1Q8NGP9 310 aa15.53■□□□□ 0.08
CLTCL1-207ENST00000611723 OR6Y1Q8NGX8 325 aa15.53■□□□□ 0.08
CLTCL1-207ENST00000611723 MGARPQ8TDB4 240 aa15.53■□□□□ 0.08
CLTCL1-207ENST00000611723 FBXL8Q96CD0 374 aa15.53■□□□□ 0.08
CLTCL1-207ENST00000611723 PKP4Q99569 1192 aa15.53■□□□□ 0.08
CLTCL1-207ENST00000611723 KIR3DX1Q9H7L2 352 aa15.53■□□□□ 0.08
CLTCL1-207ENST00000611723 MLXIPLQ9NP71 852 aa15.53■□□□□ 0.08
CLTCL1-207ENST00000611723 POT1Q9NUX5 634 aa15.53■□□□□ 0.08
CLTCL1-207ENST00000611723 IMP3Q9NV31 184 aaKnown RBP15.53■□□□□ 0.08
CLTCL1-207ENST00000611723 CD274Q9NZQ7 290 aa15.53■□□□□ 0.08
CLTCL1-207ENST00000611723 OGFRQ9NZT2 677 aa15.53■□□□□ 0.08
CLTCL1-207ENST00000611723 SIRPGQ9P1W8 387 aa15.53■□□□□ 0.08
CLTCL1-207ENST00000611723 CFAP20Q9Y6A4 193 aaKnown RBP15.53■□□□□ 0.08
CLTCL1-207ENST00000611723 CACNA1GO43497 2377 aa15.53■□□□□ 0.08
CLTCL1-207ENST00000611723 PCDHGA12O60330 932 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 NOBOXO60393 691 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 TRIM13O60858 407 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 SDC3O75056 442 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 S100BP04271 92 aaPredicted RBP15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 ZNF883P0CG24 379 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 ERGP11308 486 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 ENGP17813 658 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 IMPDH1P20839 514 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 KCNA4P22459 653 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 CCT8P50990 548 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 ARHGAP19Q14CB8 494 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 SETDB1Q15047 1291 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 CCSMST1Q4G0I0 132 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 LIPMQ5VYY2 423 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 SLC9B2Q86UD5 537 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 NUDCD3Q8IVD9 361 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 C10orf107Q8IVU9 208 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 RBM12BQ8IXT5 1001 aaKnown RBP15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 KLHDC8AQ8IYD2 350 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 FBXO39Q8N4B4 442 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 ATL1Q8WXF7 558 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 CXorf40BQ96DE9 158 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 CAMK1GQ96NX5 476 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 C1QTNF3Q9BXJ4 246 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 IL21RQ9HBE5 538 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 SLC40A1Q9NP59 571 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 ARL15Q9NXU5 204 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 UTP6Q9NYH9 597 aaKnown RBP15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 SPATA7Q9P0W8 599 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 CPNE7Q9UBL6 633 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 GMEB2Q9UKD1 530 aa15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 CDV3Q9UKY7 258 aaKnown RBP15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 TNPO3Q9Y5L0 923 aaKnown RBP15.52■□□□□ 0.08
CLTCL1-207ENST00000611723 PABPN1LA6NDY0 278 aaKnown RBP15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 TAPBPO15533 448 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 KDM1AO60341 852 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 LRP3O75074 770 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 GUCA1CO95843 209 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 GFAPP14136 432 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 FASLGP48023 281 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 NAA20P61599 178 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 ASPHQ12797 758 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 KRT33BQ14525 404 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 PCBP2Q15366 365 aaKnown RBP eCLIP15.51■□□□□ 0.077e-13■■■■■ 53.1
CLTCL1-207ENST00000611723 CYP2A13Q16696 494 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 ST3GAL2Q16842 350 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 PFKFB4Q16877 469 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 DEFB133Q30KQ1 61 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 C6orf132Q5T0Z8 1188 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 DUS1LQ6P1R4 473 aaKnown RBP15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 DBX2Q6ZNG2 339 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 RAB44Q7Z6P3 723 aaPredicted RBP15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 TRIM42Q8IWZ5 723 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 PTGR2Q8N8N7 351 aaPredicted RBP15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 GPR156Q8NFN8 814 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 RAB3IL1Q8TBN0 382 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 MAPK15Q8TD08 544 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 SLC37A2Q8TED4 501 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 UBTD2Q8WUN7 234 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 CKAP2Q8WWK9 683 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 EXT2Q93063 718 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 PHF21BQ96EK2 531 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 L3HYPDHQ96EM0 354 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 PAIP2Q9BPZ3 127 aaKnown RBP15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 MENTQ9BUN1 341 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 MECRQ9BV79 373 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 DUSP23Q9BVJ7 150 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 SMOC1Q9H4F8 434 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 UCK1Q9HA47 277 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 NLGN3Q9NZ94 848 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 NCKIPSDQ9NZQ3 722 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 STOX2Q9P2F5 926 aaPredicted RBP15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 PCDHGB2Q9Y5G2 931 aa15.51■□□□□ 0.07
CLTCL1-207ENST00000611723 RALGAPA1Q6GYQ0 2036 aa15.5■□□□□ 0.07
CLTCL1-207ENST00000611723 TRBV23OR9-2A0A075B6M9 112 aa15.5■□□□□ 0.07
CLTCL1-207ENST00000611723 NCF1BA6NI72 391 aaPredicted RBP15.5■□□□□ 0.07
CLTCL1-207ENST00000611723 NCF1CA8MVU1 366 aaPredicted RBP15.5■□□□□ 0.07
CLTCL1-207ENST00000611723 VIPP01282 170 aa15.5■□□□□ 0.07
CLTCL1-207ENST00000611723 FGF3P11487 239 aaPredicted RBP15.5■□□□□ 0.07
CLTCL1-207ENST00000611723 NCF1P14598 390 aaPredicted RBP15.5■□□□□ 0.07
CLTCL1-207ENST00000611723 IMPA1P29218 277 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms