RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 PSMD11O00231 422 aa27.34■■□□□ 1.97
CSPG5-205ENST00000610462 KPNA3O00505 521 aaPredicted RBP27.34■■□□□ 1.97
CSPG5-205ENST00000610462 GSTM1P09488 218 aa27.34■■□□□ 1.97
CSPG5-205ENST00000610462 GSTM4Q03013 218 aa27.34■■□□□ 1.97
CSPG5-205ENST00000610462 GRIN2CQ14957 1233 aa27.34■■□□□ 1.97
CSPG5-205ENST00000610462 USP39Q53GS9 565 aaKnown RBP27.34■■□□□ 1.97
CSPG5-205ENST00000610462 C6orf52Q5T4I8 152 aa27.34■■□□□ 1.97
CSPG5-205ENST00000610462 PROSER1Q86XN7 944 aa27.34■■□□□ 1.97
CSPG5-205ENST00000610462 RASGEF1AQ8N9B8 481 aa27.34■■□□□ 1.97
CSPG5-205ENST00000610462 PHC3Q8NDX5 983 aa27.34■■□□□ 1.97
CSPG5-205ENST00000610462 UBAP1Q9NZ09 502 aa27.34■■□□□ 1.97
CSPG5-205ENST00000610462 SLC22A14Q9Y267 594 aa27.34■■□□□ 1.97
CSPG5-205ENST00000610462 INPP4BO15327 924 aa27.34■■□□□ 1.97
CSPG5-205ENST00000610462 KCNH1O95259 989 aa27.34■■□□□ 1.97
CSPG5-205ENST00000610462 PRNPP04156 253 aa27.34■■□□□ 1.97
CSPG5-205ENST00000610462 NRF1Q16656 503 aa27.34■■□□□ 1.97
CSPG5-205ENST00000610462 SUSD1Q6UWL2 747 aa27.34■■□□□ 1.97
CSPG5-205ENST00000610462 ADGRD2Q7Z7M1 963 aa27.34■■□□□ 1.97
CSPG5-205ENST00000610462 NXPE3Q969Y0 559 aa27.34■■□□□ 1.97
CSPG5-205ENST00000610462 ELOVL6Q9H5J4 265 aa27.34■■□□□ 1.97
CSPG5-205ENST00000610462 ITM2BQ9Y287 266 aa27.34■■□□□ 1.97
CSPG5-205ENST00000610462 AK5Q9Y6K8 562 aa27.34■■□□□ 1.97
CSPG5-205ENST00000610462 LRRK1Q38SD2 2015 aa27.34■■□□□ 1.97
CSPG5-205ENST00000610462 TMEM202A6NGA9 273 aa27.33■■□□□ 1.97
CSPG5-205ENST00000610462 PRRT4C9JH25 899 aa27.33■■□□□ 1.97
CSPG5-205ENST00000610462 WNT9AO14904 365 aa27.33■■□□□ 1.97
CSPG5-205ENST00000610462 NCK1P16333 377 aa27.33■■□□□ 1.97
CSPG5-205ENST00000610462 CTSCP53634 463 aa27.33■■□□□ 1.97
CSPG5-205ENST00000610462 KCNC3Q14003 757 aa27.33■■□□□ 1.97
CSPG5-205ENST00000610462 RNF220Q5VTB9 566 aa27.33■■□□□ 1.97
CSPG5-205ENST00000610462 BPIFB1Q8TDL5 484 aa27.33■■□□□ 1.97
CSPG5-205ENST00000610462 MAGEB10Q96LZ2 347 aaPredicted RBP27.33■■□□□ 1.97
CSPG5-205ENST00000610462 CIB1Q99828 191 aa27.33■■□□□ 1.97
CSPG5-205ENST00000610462 CLMPQ9H6B4 373 aa27.33■■□□□ 1.97
CSPG5-205ENST00000610462 C7orf72A4D263 438 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 TSPAN6O43657 245 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 ATG13O75143 517 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 PSIP1O75475 530 aaKnown RBP27.32■■□□□ 1.96
CSPG5-205ENST00000610462 IL6P05231 212 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 UMPSP11172 480 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 BCKDHAP12694 445 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 OXTRP30559 389 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 SLC6A11P48066 632 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 PRLHRP49683 370 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 MESP2Q0VG99 397 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 GPM6BQ13491 265 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 CYP51A1Q16850 503 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 FAM174BQ3ZCQ3 159 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 SYTL3Q4VX76 610 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 OR8J3Q8NGG0 315 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 SLC29A1Q99808 456 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 USP22Q9UPT9 525 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 NEUROG3Q9Y4Z2 214 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 PCDHB3Q9Y5E6 796 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 C2orf16Q68DN1 1984 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 KANSL1LA0AUZ9 987 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 KRT87PA6NCN2 255 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 NFATC1O95644 943 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 ITPKAP23677 461 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 PRPH2P23942 346 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 OR4D2P58180 307 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 PFN3P60673 137 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 PRKCQQ04759 706 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 TMEM115Q12893 351 aaPredicted RBP27.32■■□□□ 1.96
CSPG5-205ENST00000610462 SELPLGQ14242 412 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 TMC5Q6UXY8 1006 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 TRPV3Q8NET8 790 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 GLMNQ92990 594 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 CNBD2Q96M20 576 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 COQ10AQ96MF6 247 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 CCM2Q9BSQ5 444 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 ATG10Q9H0Y0 220 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 AGPAT4Q9NRZ5 378 aa27.32■■□□□ 1.96
CSPG5-205ENST00000610462 MUC22E2RYF6 1773 aaPredicted RBP27.32■■□□□ 1.96
CSPG5-205ENST00000610462 TCF20Q9UGU0 1960 aaKnown RBP27.32■■□□□ 1.96
CSPG5-205ENST00000610462 FASP25445 335 aa27.31■■□□□ 1.96
CSPG5-205ENST00000610462 MAP4P27816 1152 aaKnown RBP27.31■■□□□ 1.96
CSPG5-205ENST00000610462 LBX1P52954 281 aa27.31■■□□□ 1.96
CSPG5-205ENST00000610462 ABRQ12979 859 aa27.31■■□□□ 1.96
CSPG5-205ENST00000610462 SLC44A4Q53GD3 710 aa27.31■■□□□ 1.96
CSPG5-205ENST00000610462 FAM78AQ5JUQ0 283 aa27.31■■□□□ 1.96
CSPG5-205ENST00000610462 RALGPS2Q86X27 583 aaPredicted RBP27.31■■□□□ 1.96
CSPG5-205ENST00000610462 GTF2H4Q92759 462 aa27.31■■□□□ 1.96
CSPG5-205ENST00000610462 TMEM159Q96B96 161 aa27.31■■□□□ 1.96
CSPG5-205ENST00000610462 ZFYVE19Q96K21 471 aa27.31■■□□□ 1.96
CSPG5-205ENST00000610462 WRAP53Q9BUR4 548 aaKnown RBP27.31■■□□□ 1.96
CSPG5-205ENST00000610462 FAM8A1Q9UBU6 413 aa27.31■■□□□ 1.96
CSPG5-205ENST00000610462 SERTM1A2A2V5 107 aa27.31■■□□□ 1.96
CSPG5-205ENST00000610462 ARHGEF33A8MVX0 844 aa27.31■■□□□ 1.96
CSPG5-205ENST00000610462 H0Y858 1186 aa27.31■■□□□ 1.96
CSPG5-205ENST00000610462 PRAMEF4O60810 478 aa27.31■■□□□ 1.96
CSPG5-205ENST00000610462 HRH2P25021 359 aa27.31■■□□□ 1.96
CSPG5-205ENST00000610462 MTPNP58546 118 aa27.31■■□□□ 1.96
CSPG5-205ENST00000610462 MAPKAPK3Q16644 382 aa27.31■■□□□ 1.96
CSPG5-205ENST00000610462 PLA2G4EQ3MJ16 856 aa27.31■■□□□ 1.96
CSPG5-205ENST00000610462 FNDC3BQ53EP0 1204 aaKnown RBP27.31■■□□□ 1.96
CSPG5-205ENST00000610462 SPANXN4Q5MJ08 99 aa27.31■■□□□ 1.96
CSPG5-205ENST00000610462 PRAMEF9Q5VWM5 478 aa27.31■■□□□ 1.96
CSPG5-205ENST00000610462 PPP4R4Q6NUP7 873 aa27.31■■□□□ 1.96
CSPG5-205ENST00000610462 ZBTB49Q6ZSB9 765 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms