RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 SHBQ15464 509 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 RPE65Q16518 533 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 KIF19Q2TAC6 998 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 UAP1L1Q3KQV9 507 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 ARL13AQ5H913 290 aaPredicted RBP11.24□□□□□ -0.61
CTCFL-221ENST00000608903 TLDC1Q6P9B6 456 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 ABRAXAS1Q6UWZ7 409 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 FRA10AC1Q70Z53 315 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 SLC22A9Q8IVM8 553 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 IL17FQ96PD4 163 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 PLCD4Q9BRC7 762 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 MENTQ9BUN1 341 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 ARL15Q9NXU5 204 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 PCOLCE2Q9UKZ9 415 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 ASF1AQ9Y294 204 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 SNX11Q9Y5W9 270 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 KLHL33A6NCF5 533 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 E2F3O00716 465 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 ENO2P09104 434 aaPredicted RBP11.24□□□□□ -0.61
CTCFL-221ENST00000608903 NME1P15531 152 aaKnown RBP11.24□□□□□ -0.61
CTCFL-221ENST00000608903 EPORP19235 508 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 AFF3P51826 1226 aaKnown RBP11.24□□□□□ -0.61
CTCFL-221ENST00000608903 ABCE1P61221 599 aaKnown RBP11.24□□□□□ -0.61
CTCFL-221ENST00000608903 CDKL1Q00532 357 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 LRP8Q14114 963 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 FASTKQ14296 549 aaKnown RBP11.24□□□□□ -0.61
CTCFL-221ENST00000608903 LPAL2Q16609 132 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 PRRT3Q5FWE3 981 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 UNC5DQ6UXZ4 953 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 WASH2PQ6VEQ5 465 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 LRRC56Q8IYG6 542 aaPredicted RBP11.24□□□□□ -0.61
CTCFL-221ENST00000608903 FBXO15Q8NCQ5 510 aaPredicted RBP11.24□□□□□ -0.61
CTCFL-221ENST00000608903 PPFIBP2Q8ND30 876 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 MCOLN3Q8TDD5 553 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 ZNF483Q8TF39 744 aaPredicted RBP11.24□□□□□ -0.61
CTCFL-221ENST00000608903 PIGKQ92643 395 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 C12orf66Q96MD2 445 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 EGFL8Q99944 293 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 C1QTNF3Q9BXJ4 246 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 DRC3Q9H069 523 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 ATG10Q9H0Y0 220 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 WASH6PQ9NQA3 447 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 PNPOQ9NVS9 261 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 TAAR2Q9P1P5 351 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 STOX2Q9P2F5 926 aaPredicted RBP11.24□□□□□ -0.61
CTCFL-221ENST00000608903 ZNF225Q9UK10 706 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 PCTPQ9UKL6 214 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 TRIM33Q9UPN9 1127 aa11.24□□□□□ -0.61
CTCFL-221ENST00000608903 CACNA1EQ15878 2313 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 PDZK1P1A8MUH7 402 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 PATE3B3GLJ2 98 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 KIF1CO43896 1103 aaKnown RBP11.23□□□□□ -0.61
CTCFL-221ENST00000608903 SUPT7LO94864 414 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 SLC16A8O95907 504 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 CATP04040 527 aaKnown RBP11.23□□□□□ -0.61
CTCFL-221ENST00000608903 SLC35G4P0C7Q5 338 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 CYP2A7P20853 494 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 IMPA1P29218 277 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 PRDX3P30048 256 aaKnown RBP11.23□□□□□ -0.61
CTCFL-221ENST00000608903 SLC19A1P41440 591 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 CTSKP43235 329 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 PCBP2Q15366 365 aaKnown RBP eCLIP11.23□□□□□ -0.61
CTCFL-221ENST00000608903 PEAR1Q5VY43 1037 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-221ENST00000608903 SULT1C3Q6IMI6 304 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 FRMD7Q6ZUT3 714 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 CEP68Q76N32 757 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 PPP1R14CQ8TAE6 165 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 RAB3IL1Q8TBN0 382 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 UBTD2Q8WUN7 234 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 ZNF480Q8WV37 535 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 PYCR2Q96C36 320 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 FBXL8Q96CD0 374 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 ERP27Q96DN0 273 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 CCDC126Q96EE4 140 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 IMP3Q9NV31 184 aaKnown RBP11.23□□□□□ -0.61
CTCFL-221ENST00000608903 UCKL1Q9NWZ5 548 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 APOBEC3BQ9UH17 382 aaKnown RBP11.23□□□□□ -0.61
CTCFL-221ENST00000608903 ADAMTS9Q9P2N4 1935 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 A0A1B0GTW7 788 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 GALR2O43603 387 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-221ENST00000608903 NPHS1O60500 1241 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 PRAMEF4O60810 478 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 SDC3O75056 442 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 ANXA5P08758 320 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 GRK2P25098 689 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 MPSTP25325 297 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 GGT5P36269 586 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 SLC6A12P48065 614 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 SIM2Q14190 667 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-221ENST00000608903 RCN2Q14257 317 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 PRAMEF9Q5VWM5 478 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 ATG16L1Q676U5 607 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 C11orf74Q86VG3 221 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 TRIM42Q8IWZ5 723 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 ZNF781Q8N8C0 355 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 OR9A1PQ8NGU1 263 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 OR5K2Q8NHB8 316 aa11.23□□□□□ -0.61
CTCFL-221ENST00000608903 JPH3Q8WXH2 748 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-221ENST00000608903 N4BP2L2Q92802 583 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-221ENST00000608903 PRR11Q96HE9 360 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms