RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 TREX1Q9NSU2 369 aa18.64■□□□□ 0.57
SGMS1-208ENST00000608287 NEU2Q9Y3R4 380 aa18.64■□□□□ 0.57
SGMS1-208ENST00000608287 HEBP2Q9Y5Z4 205 aa18.64■□□□□ 0.57
SGMS1-208ENST00000608287 COLEC10Q9Y6Z7 277 aa18.64■□□□□ 0.57
SGMS1-208ENST00000608287 F8W8V4 182 aa18.63■□□□□ 0.57
SGMS1-208ENST00000608287 GOLGA8MH3BSY2 632 aa18.63■□□□□ 0.57
SGMS1-208ENST00000608287 IFRD1O00458 451 aaPredicted RBP18.63■□□□□ 0.57
SGMS1-208ENST00000608287 CD3EAPO15446 510 aaKnown RBP18.63■□□□□ 0.57
SGMS1-208ENST00000608287 GRNP28799 593 aaKnown RBP18.63■□□□□ 0.57
SGMS1-208ENST00000608287 PDHA2P29803 388 aa18.63■□□□□ 0.57
SGMS1-208ENST00000608287 PREPP48147 710 aa18.63■□□□□ 0.57
SGMS1-208ENST00000608287 SH3BP2P78314 561 aa18.63■□□□□ 0.57
SGMS1-208ENST00000608287 RPA4Q13156 261 aa18.63■□□□□ 0.57
SGMS1-208ENST00000608287 BRD3Q15059 726 aa18.63■□□□□ 0.57
SGMS1-208ENST00000608287 ZNF658BQ4V348 819 aaPredicted RBP18.63■□□□□ 0.57
SGMS1-208ENST00000608287 CASC4Q6P4E1 433 aa18.63■□□□□ 0.57
SGMS1-208ENST00000608287 KLHL35Q6PF15 583 aa18.63■□□□□ 0.57
SGMS1-208ENST00000608287 LDB1Q86U70 411 aaPredicted RBP18.63■□□□□ 0.57
SGMS1-208ENST00000608287 OTUD6BQ8N6M0 293 aa18.63■□□□□ 0.57
SGMS1-208ENST00000608287 ZFPM2Q8WW38 1151 aa18.63■□□□□ 0.57
SGMS1-208ENST00000608287 ELMO1Q92556 727 aa18.63■□□□□ 0.57
SGMS1-208ENST00000608287 MFSD3Q96ES6 412 aa18.63■□□□□ 0.57
SGMS1-208ENST00000608287 FERD3LQ96RJ6 166 aa18.63■□□□□ 0.57
SGMS1-208ENST00000608287 DDX47Q9H0S4 455 aaKnown RBP18.63■□□□□ 0.57
SGMS1-208ENST00000608287 OR52A5Q9H2C5 316 aa18.63■□□□□ 0.57
SGMS1-208ENST00000608287 MRM3Q9HC36 420 aaKnown RBP18.63■□□□□ 0.57
SGMS1-208ENST00000608287 GPR83Q9NYM4 423 aa18.63■□□□□ 0.57
SGMS1-208ENST00000608287 C5AR2Q9P296 337 aa18.63■□□□□ 0.57
SGMS1-208ENST00000608287 MARCH4Q9P2E8 410 aaPredicted RBP18.63■□□□□ 0.57
SGMS1-208ENST00000608287 SOX13Q9UN79 622 aa18.63■□□□□ 0.57
SGMS1-208ENST00000608287 SAR1BQ9Y6B6 198 aa18.63■□□□□ 0.57
SGMS1-208ENST00000608287 CTAGE9A4FU28 777 aa18.62■□□□□ 0.57
SGMS1-208ENST00000608287 LIN7AO14910 233 aaPredicted RBP18.62■□□□□ 0.57
SGMS1-208ENST00000608287 NDUFS1P28331 727 aa18.62■□□□□ 0.57
SGMS1-208ENST00000608287 TTPAP49638 278 aa18.62■□□□□ 0.57
SGMS1-208ENST00000608287 ITGA1P56199 1179 aa18.62■□□□□ 0.57
SGMS1-208ENST00000608287 ACY1Q03154 408 aa18.62■□□□□ 0.57
SGMS1-208ENST00000608287 CHAF1BQ13112 559 aa18.62■□□□□ 0.57
SGMS1-208ENST00000608287 BOP1Q14137 746 aaKnown RBP18.62■□□□□ 0.57
SGMS1-208ENST00000608287 SYTL3Q4VX76 610 aa18.62■□□□□ 0.57
SGMS1-208ENST00000608287 FAM92BQ6ZTR7 304 aa18.62■□□□□ 0.57
SGMS1-208ENST00000608287 MED25Q71SY5 747 aa18.62■□□□□ 0.57
SGMS1-208ENST00000608287 CAND1Q86VP6 1230 aaKnown RBP18.62■□□□□ 0.57
SGMS1-208ENST00000608287 MPP5Q8N3R9 675 aa18.62■□□□□ 0.57
SGMS1-208ENST00000608287 TMEM102Q8N9M5 508 aaPredicted RBP18.62■□□□□ 0.57
SGMS1-208ENST00000608287 MFRPQ9BY79 579 aa18.62■□□□□ 0.57
SGMS1-208ENST00000608287 KIR3DX1Q9H7L2 352 aa18.62■□□□□ 0.57
SGMS1-208ENST00000608287 LUZP4Q9P127 313 aa18.62■□□□□ 0.57
SGMS1-208ENST00000608287 SAMD15Q9P1V8 674 aa18.62■□□□□ 0.57
SGMS1-208ENST00000608287 SLC24A2Q9UI40 661 aa18.62■□□□□ 0.57
SGMS1-208ENST00000608287 FARSAQ9Y285 508 aaKnown RBP18.62■□□□□ 0.57
SGMS1-208ENST00000608287 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.62■□□□□ 0.57
SGMS1-208ENST00000608287 VAPBO95292 243 aa18.61■□□□□ 0.57
SGMS1-208ENST00000608287 MLNP12872 115 aa18.61■□□□□ 0.57
SGMS1-208ENST00000608287 NELFEP18615 380 aaKnown RBP18.61■□□□□ 0.57
SGMS1-208ENST00000608287 CD151P48509 253 aa18.61■□□□□ 0.57
SGMS1-208ENST00000608287 TUBB3Q13509 450 aa18.61■□□□□ 0.57
SGMS1-208ENST00000608287 CACHD1Q5VU97 1274 aa18.61■□□□□ 0.57
SGMS1-208ENST00000608287 NAPRTQ6XQN6 538 aa18.61■□□□□ 0.57
SGMS1-208ENST00000608287 MCUQ8NE86 351 aa18.61■□□□□ 0.57
SGMS1-208ENST00000608287 KLHL6Q8WZ60 621 aa18.61■□□□□ 0.57
SGMS1-208ENST00000608287 UBXN4Q92575 508 aa18.61■□□□□ 0.57
SGMS1-208ENST00000608287 SNRNP40Q96DI7 357 aaKnown RBP18.61■□□□□ 0.57
SGMS1-208ENST00000608287 SERPINB12Q96P63 405 aa18.61■□□□□ 0.57
SGMS1-208ENST00000608287 RAB33BQ9H082 229 aa18.61■□□□□ 0.57
SGMS1-208ENST00000608287 XAB2Q9HCS7 855 aaKnown RBP18.61■□□□□ 0.57
SGMS1-208ENST00000608287 EPHA6Q9UF33 1036 aa18.61■□□□□ 0.57
SGMS1-208ENST00000608287 ASIC3Q9UHC3 531 aa18.61■□□□□ 0.57
SGMS1-208ENST00000608287 ARHGAP10A1A4S6 786 aa18.6■□□□□ 0.57
SGMS1-208ENST00000608287 KIF1CO43896 1103 aaKnown RBP18.6■□□□□ 0.57
SGMS1-208ENST00000608287 CPNE3O75131 537 aaKnown RBP18.6■□□□□ 0.57
SGMS1-208ENST00000608287 NDUFS3O75489 264 aa18.6■□□□□ 0.57
SGMS1-208ENST00000608287 ALPPP05187 535 aa18.6■□□□□ 0.57
SGMS1-208ENST00000608287 PTGIRP43119 386 aa18.6■□□□□ 0.57
SGMS1-208ENST00000608287 PPP1CAP62136 330 aa18.6■□□□□ 0.57
SGMS1-208ENST00000608287 ZXDCQ2QGD7 858 aaPredicted RBP18.6■□□□□ 0.57
SGMS1-208ENST00000608287 IZUMO3Q5VZ72 239 aa18.6■□□□□ 0.57
SGMS1-208ENST00000608287 OOSP2Q86WS3 158 aa18.6■□□□□ 0.57
SGMS1-208ENST00000608287 CREG2Q8IUH2 290 aa18.6■□□□□ 0.57
SGMS1-208ENST00000608287 PPIL6Q8IXY8 311 aa18.6■□□□□ 0.57
SGMS1-208ENST00000608287 RBMXL3Q8N7X1 1067 aaKnown RBP18.6■□□□□ 0.57
SGMS1-208ENST00000608287 SIDT2Q8NBJ9 832 aaKnown RBP18.6■□□□□ 0.57
SGMS1-208ENST00000608287 PHC3Q8NDX5 983 aa18.6■□□□□ 0.57
SGMS1-208ENST00000608287 ACVR1CQ8NER5 493 aa18.6■□□□□ 0.57
SGMS1-208ENST00000608287 FDCSPQ8NFU4 85 aa18.6■□□□□ 0.57
SGMS1-208ENST00000608287 TFGQ92734 400 aaPredicted RBP18.6■□□□□ 0.57
SGMS1-208ENST00000608287 SMAD5Q99717 465 aaKnown RBP18.6■□□□□ 0.57
SGMS1-208ENST00000608287 TSSK1BQ9BXA7 367 aa18.6■□□□□ 0.57
SGMS1-208ENST00000608287 AGPAT4Q9NRZ5 378 aa18.6■□□□□ 0.57
SGMS1-208ENST00000608287 HRASLS2Q9NWW9 162 aa18.6■□□□□ 0.57
SGMS1-208ENST00000608287 SNX7Q9UNH6 387 aa18.6■□□□□ 0.57
SGMS1-208ENST00000608287 OTOGQ6ZRI0 2925 aa18.6■□□□□ 0.57
SGMS1-208ENST00000608287 DIDO1Q9BTC0 2240 aaKnown RBP18.59■□□□□ 0.57
SGMS1-208ENST00000608287 OR6C74A6NCV1 312 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 OR5K3A6NET4 321 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 SDR42E2A6NKP2 422 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 GOLGA8KD6RF30 607 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 GOLGA8TH3BQL2 631 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 PRMT5O14744 637 aaPredicted RBP18.59■□□□□ 0.57
SGMS1-208ENST00000608287 KLK3P07288 261 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms