RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 MLLT10P55197 1068 aa18.11■□□□□ 0.49
PNKP-213ENST00000599543 UBAP2LQ14157 1087 aaKnown RBP18.11■□□□□ 0.49
PNKP-213ENST00000599543 PTCHD3Q3KNS1 767 aa18.11■□□□□ 0.49
PNKP-213ENST00000599543 LYPLAL1Q5VWZ2 237 aa18.11■□□□□ 0.49
PNKP-213ENST00000599543 AFTPHQ6ULP2 937 aa18.11■□□□□ 0.49
PNKP-213ENST00000599543 FAM198BQ6UWH4 519 aa18.11■□□□□ 0.49
PNKP-213ENST00000599543 UNC5AQ6ZN44 842 aa18.11■□□□□ 0.49
PNKP-213ENST00000599543 ATCAYQ86WG3 371 aa18.11■□□□□ 0.49
PNKP-213ENST00000599543 TBC1D21Q8IYX1 336 aa18.11■□□□□ 0.49
PNKP-213ENST00000599543 OR13J1Q8NGT2 312 aa18.11■□□□□ 0.49
PNKP-213ENST00000599543 OR5K2Q8NHB8 316 aa18.11■□□□□ 0.49
PNKP-213ENST00000599543 COL26A1Q96A83 441 aa18.11■□□□□ 0.49
PNKP-213ENST00000599543 MIB2Q96AX9 1013 aa18.11■□□□□ 0.49
PNKP-213ENST00000599543 TRIM44Q96DX7 344 aaPredicted RBP18.11■□□□□ 0.49
PNKP-213ENST00000599543 CCDC88CQ9P219 2028 aa18.11■□□□□ 0.49
PNKP-213ENST00000599543 SPTAN1Q13813 2472 aaKnown RBP18.11■□□□□ 0.49
PNKP-213ENST00000599543 ZNF749O43361 778 aa18.1■□□□□ 0.49
PNKP-213ENST00000599543 KDM1AO60341 852 aa18.1■□□□□ 0.49
PNKP-213ENST00000599543 TMEM63AO94886 807 aa18.1■□□□□ 0.49
PNKP-213ENST00000599543 CHRM5P08912 532 aaPredicted RBP18.1■□□□□ 0.49
PNKP-213ENST00000599543 UGT2B7P16662 529 aa18.1■□□□□ 0.49
PNKP-213ENST00000599543 AGXTP21549 392 aa18.1■□□□□ 0.49
PNKP-213ENST00000599543 ACADLP28330 430 aa18.1■□□□□ 0.49
PNKP-213ENST00000599543 MRPS25P82663 173 aaKnown RBP18.1■□□□□ 0.49
PNKP-213ENST00000599543 NCF4Q15080 339 aa18.1■□□□□ 0.49
PNKP-213ENST00000599543 FAM69BQ5VUD6 431 aa18.1■□□□□ 0.49
PNKP-213ENST00000599543 ANKRD22Q5VYY1 191 aa18.1■□□□□ 0.49
PNKP-213ENST00000599543 NAPRTQ6XQN6 538 aa18.1■□□□□ 0.49
PNKP-213ENST00000599543 TRIM73Q86UV7 250 aa18.1■□□□□ 0.49
PNKP-213ENST00000599543 ADAMTS17Q8TE56 1095 aa18.1■□□□□ 0.49
PNKP-213ENST00000599543 HDAC10Q969S8 669 aa18.1■□□□□ 0.49
PNKP-213ENST00000599543 TCTN2Q96GX1 697 aa18.1■□□□□ 0.49
PNKP-213ENST00000599543 OR6C2Q9NZP2 312 aa18.1■□□□□ 0.49
PNKP-213ENST00000599543 G3BP2Q9UN86 482 aaKnown RBP18.1■□□□□ 0.49
PNKP-213ENST00000599543 PADI2Q9Y2J8 665 aa18.1■□□□□ 0.49
PNKP-213ENST00000599543 USP9YO00507 2555 aaPredicted RBP18.09■□□□□ 0.49
PNKP-213ENST00000599543 SPTBN1Q01082 2364 aaKnown RBP18.09■□□□□ 0.49
PNKP-213ENST00000599543 SLC5A10A0PJK1 596 aa18.09■□□□□ 0.49
PNKP-213ENST00000599543 OR1I1O60431 355 aa18.09■□□□□ 0.49
PNKP-213ENST00000599543 OR2B3O76000 313 aa18.09■□□□□ 0.49
PNKP-213ENST00000599543 SUN1O94901 812 aa18.09■□□□□ 0.49
PNKP-213ENST00000599543 GOT2P00505 430 aaKnown RBP18.09■□□□□ 0.49
PNKP-213ENST00000599543 SESN2P58004 480 aaPredicted RBP18.09■□□□□ 0.49
PNKP-213ENST00000599543 CRADDP78560 199 aa18.09■□□□□ 0.49
PNKP-213ENST00000599543 TSTD2Q5T7W7 516 aa18.09■□□□□ 0.49
PNKP-213ENST00000599543 ZNF592Q92610 1267 aa18.09■□□□□ 0.49
PNKP-213ENST00000599543 OR2A14Q96R47 310 aa18.09■□□□□ 0.49
PNKP-213ENST00000599543 RANBP9Q96S59 729 aa18.09■□□□□ 0.49
PNKP-213ENST00000599543 TSSK1BQ9BXA7 367 aa18.09■□□□□ 0.49
PNKP-213ENST00000599543 SLC2A6Q9UGQ3 507 aa18.09■□□□□ 0.49
PNKP-213ENST00000599543 NEU2Q9Y3R4 380 aa18.09■□□□□ 0.49
PNKP-213ENST00000599543 A0A0J9YY10 115 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 TTLL8A6PVC2 850 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 BHMG1C9JSJ3 638 aaPredicted RBP18.08■□□□□ 0.48
PNKP-213ENST00000599543 CAPN1P07384 714 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 ADRA1DP25100 572 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 PPARGP37231 505 aaPredicted RBP18.08■□□□□ 0.48
PNKP-213ENST00000599543 PAFAH1B1P43034 410 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 CD97P48960 835 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 FNTAP49354 379 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 CSE1LP55060 971 aaKnown RBP18.08■□□□□ 0.48
PNKP-213ENST00000599543 PRAMEP78395 509 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 DEFB110Q30KQ9 67 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 FASTKD1Q53R41 847 aaKnown RBP18.08■□□□□ 0.48
PNKP-213ENST00000599543 NLRP9Q7RTR0 991 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 OR6P1Q8NGX9 317 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 OR4L1Q8NH43 312 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 C17orf62Q9BQA9 187 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 DHRS4Q9BTZ2 278 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 FAM60AQ9NP50 221 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 CASS4Q9NQ75 786 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 IRAK4Q9NWZ3 460 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 SPHK1Q9NYA1 384 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 ANKMY1Q9P2S6 941 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 RIMKLBQ9ULI2 386 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 PLAGL1Q9UM63 463 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 AP1M2Q9Y6Q5 423 aa18.08■□□□□ 0.48
PNKP-213ENST00000599543 ANKRD12Q6UB98 2062 aa18.07■□□□□ 0.48
PNKP-213ENST00000599543 CYSRT1A8MQ03 144 aa18.07■□□□□ 0.48
PNKP-213ENST00000599543 GOLGA8MH3BSY2 632 aa18.07■□□□□ 0.48
PNKP-213ENST00000599543 RRADP55042 308 aa18.07■□□□□ 0.48
PNKP-213ENST00000599543 C2orf54Q08AI8 447 aa18.07■□□□□ 0.48
PNKP-213ENST00000599543 PPP1R7Q15435 360 aa18.07■□□□□ 0.48
PNKP-213ENST00000599543 ZIC1Q15915 447 aa18.07■□□□□ 0.48
PNKP-213ENST00000599543 DNAJC21Q5F1R6 531 aaKnown RBP18.07■□□□□ 0.48
PNKP-213ENST00000599543 MED25Q71SY5 747 aa18.07■□□□□ 0.48
PNKP-213ENST00000599543 RAB43Q86YS6 212 aa18.07■□□□□ 0.48
PNKP-213ENST00000599543 FAM26EQ8N5C1 309 aa18.07■□□□□ 0.48
PNKP-213ENST00000599543 EFCAB3Q8N7B9 438 aa18.07■□□□□ 0.48
PNKP-213ENST00000599543 TMEM102Q8N9M5 508 aaPredicted RBP18.07■□□□□ 0.48
PNKP-213ENST00000599543 PPHLN1Q8NEY8 458 aaKnown RBP18.07■□□□□ 0.48
PNKP-213ENST00000599543 TRIM51Q9BSJ1 452 aa18.07■□□□□ 0.48
PNKP-213ENST00000599543 MLXIPLQ9NP71 852 aa18.07■□□□□ 0.48
PNKP-213ENST00000599543 ANAPC5Q9UJX4 755 aa18.07■□□□□ 0.48
PNKP-213ENST00000599543 TCAF1Q9Y4C2 921 aa18.07■□□□□ 0.48
PNKP-213ENST00000599543 ZNF451Q9Y4E5 1061 aa18.07■□□□□ 0.48
PNKP-213ENST00000599543 ISM1B1AKI9 464 aa18.06■□□□□ 0.48
PNKP-213ENST00000599543 ZSCAN9O15535 394 aaPredicted RBP18.06■□□□□ 0.48
PNKP-213ENST00000599543 RPN2P04844 631 aa18.06■□□□□ 0.48
PNKP-213ENST00000599543 TPBGLP0DKB5 382 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms