RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 CD300AQ9UGN4 299 aa16.61■□□□□ 0.25
SHKBP1-216ENST00000598201 LIMD1Q9UGP4 676 aa16.61■□□□□ 0.25
SHKBP1-216ENST00000598201 ZNF490Q9ULM2 529 aaPredicted RBP16.61■□□□□ 0.25
SHKBP1-216ENST00000598201 SLC22A14Q9Y267 594 aa16.61■□□□□ 0.25
SHKBP1-216ENST00000598201 ULK1O75385 1050 aa16.61■□□□□ 0.25
SHKBP1-216ENST00000598201 DRD3P35462 400 aa16.61■□□□□ 0.25
SHKBP1-216ENST00000598201 SLC7A2P52569 658 aa16.61■□□□□ 0.25
SHKBP1-216ENST00000598201 DPTQ07507 201 aa16.61■□□□□ 0.25
SHKBP1-216ENST00000598201 CAPRIN1Q14444 709 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-216ENST00000598201 TAF11Q15544 211 aa16.61■□□□□ 0.25
SHKBP1-216ENST00000598201 CPSF6Q16630 551 aaKnown RBP eCLIP16.61■□□□□ 0.25
SHKBP1-216ENST00000598201 ITPRIPL2Q3MIP1 535 aa16.61■□□□□ 0.25
SHKBP1-216ENST00000598201 IL23RQ5VWK5 629 aa16.61■□□□□ 0.25
SHKBP1-216ENST00000598201 TTC23LQ6PF05 361 aa16.61■□□□□ 0.25
SHKBP1-216ENST00000598201 KBTBD2Q8IY47 623 aa16.61■□□□□ 0.25
SHKBP1-216ENST00000598201 GLMNQ92990 594 aa16.61■□□□□ 0.25
SHKBP1-216ENST00000598201 USP7Q93009 1102 aa16.61■□□□□ 0.25
SHKBP1-216ENST00000598201 MTFMTQ96DP5 389 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-216ENST00000598201 ZIM2Q9NZV7 527 aa16.61■□□□□ 0.25
SHKBP1-216ENST00000598201 POLR3HQ9Y535 204 aaPredicted RBP16.61■□□□□ 0.25
SHKBP1-216ENST00000598201 KCNE1BA0A087WTH5 132 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 A0A1W2PP18 115 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 PABPN1LA6NDY0 278 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 ANHXE9PGG2 379 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 APODP05090 189 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 BDKRB1P46663 353 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 POLR2JP52435 117 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 KCNK10P57789 538 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 PFN3P60673 137 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 MRPS22P82650 360 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 ZP2Q05996 745 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 PAGE3Q5JUK9 113 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 CYP20A1Q6UW02 462 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 XKR5Q6UX68 686 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 RNF165Q6ZSG1 346 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 TRIM46Q7Z4K8 759 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 DHDDSQ86SQ9 333 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 AADATQ8N5Z0 425 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 PLA2G15Q8NCC3 412 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 FBXL8Q96CD0 374 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 TRMT61BQ9BVS5 477 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 ATXN10Q9UBB4 475 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 ZFC3H1O60293 1989 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 ANKRD28O15084 1053 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 RSL1D1O76021 490 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 SLC2A4P14672 509 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 RPL38P63173 70 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 HTR4Q13639 388 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 MUM1Q2TAK8 710 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 BCL7AQ4VC05 210 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 CHPFQ8IZ52 775 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 SLC22A15Q8IZD6 547 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 RGL4Q8IZJ4 473 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 CXorf40AQ8TE69 158 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 TSPEARQ8WU66 669 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 DNAJC9Q8WXX5 260 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 EZH1Q92800 747 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 ASB9Q96DX5 294 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 PPP3R2Q96LZ3 170 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 SLC29A3Q9BZD2 475 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 TRIM8Q9BZR9 551 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 EPHX3Q9H6B9 360 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 DNAJC11Q9NVH1 559 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 SUCOQ9UBS9 1254 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 MCM8Q9UJA3 840 aa16.6■□□□□ 0.25
SHKBP1-216ENST00000598201 FAM234BA2RU67 622 aa16.59■□□□□ 0.25
SHKBP1-216ENST00000598201 NME4O00746 187 aa16.59■□□□□ 0.25
SHKBP1-216ENST00000598201 MID1O15344 667 aa16.59■□□□□ 0.25
SHKBP1-216ENST00000598201 RGS14O43566 566 aa16.59■□□□□ 0.25
SHKBP1-216ENST00000598201 GALK1P51570 392 aa16.59■□□□□ 0.25
SHKBP1-216ENST00000598201 TAS2R38P59533 333 aa16.59■□□□□ 0.25
SHKBP1-216ENST00000598201 ENPP2Q13822 863 aa16.59■□□□□ 0.25
SHKBP1-216ENST00000598201 TRIM25Q14258 630 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-216ENST00000598201 TLR1Q15399 786 aa16.59■□□□□ 0.25
SHKBP1-216ENST00000598201 PLA2G4EQ3MJ16 856 aa16.59■□□□□ 0.25
SHKBP1-216ENST00000598201 TIGD2Q4W5G0 525 aa16.59■□□□□ 0.25
SHKBP1-216ENST00000598201 C2orf27AQ580R0 203 aa16.59■□□□□ 0.25
SHKBP1-216ENST00000598201 COQ5Q5HYK3 327 aa16.59■□□□□ 0.25
SHKBP1-216ENST00000598201 TRAPPC5Q8IUR0 188 aa16.59■□□□□ 0.25
SHKBP1-216ENST00000598201 ZNF547Q8IVP9 402 aa16.59■□□□□ 0.25
SHKBP1-216ENST00000598201 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.59■□□□□ 0.25
SHKBP1-216ENST00000598201 LRRC58Q96CX6 371 aa16.59■□□□□ 0.25
SHKBP1-216ENST00000598201 KCNK12Q9HB15 430 aa16.59■□□□□ 0.25
SHKBP1-216ENST00000598201 PCYT1BQ9Y5K3 369 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-216ENST00000598201 CCDC154A6NI56 674 aa16.58■□□□□ 0.25
SHKBP1-216ENST00000598201 SLC28A1O00337 649 aa16.58■□□□□ 0.25
SHKBP1-216ENST00000598201 NPC1O15118 1278 aa16.58■□□□□ 0.25
SHKBP1-216ENST00000598201 EEDO75530 441 aaKnown RBP16.58■□□□□ 0.25
SHKBP1-216ENST00000598201 PDYNP01213 254 aa16.58■□□□□ 0.25
SHKBP1-216ENST00000598201 MAP4P27816 1152 aaKnown RBP16.58■□□□□ 0.25
SHKBP1-216ENST00000598201 NEK2P51955 445 aa16.58■□□□□ 0.25
SHKBP1-216ENST00000598201 C6orf10Q5SRN2 563 aa16.58■□□□□ 0.25
SHKBP1-216ENST00000598201 ZFAND4Q86XD8 727 aa16.58■□□□□ 0.25
SHKBP1-216ENST00000598201 SLC15A3Q8IY34 581 aa16.58■□□□□ 0.25
SHKBP1-216ENST00000598201 CFAP206Q8IYR0 622 aa16.58■□□□□ 0.25
SHKBP1-216ENST00000598201 MINDY1Q8N5J2 469 aa16.58■□□□□ 0.25
SHKBP1-216ENST00000598201 RAB7BQ96AH8 199 aa16.58■□□□□ 0.25
SHKBP1-216ENST00000598201 ANKRD27Q96NW4 1050 aa16.58■□□□□ 0.25
SHKBP1-216ENST00000598201 ACPTQ9BZG2 426 aa16.58■□□□□ 0.25
SHKBP1-216ENST00000598201 TRIM39Q9HCM9 518 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms