RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 RORAP35398 523 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 GABRA4P48169 554 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 RAB28P51157 221 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 EIF3BP55884 814 aaKnown RBP14.55□□□□□ -0.08
LIG1-215ENST00000597901 ITGA1P56199 1179 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 RPS18P62269 152 aaKnown RBP14.55□□□□□ -0.08
LIG1-215ENST00000597901 CYP1B1Q16678 543 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 SLC5A12Q1EHB4 618 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 IZUMO3Q5VZ72 239 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 ARMC3Q5W041 872 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 MRNIPQ6NTE8 343 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 CCDC137Q6PK04 289 aaKnown RBP14.55□□□□□ -0.08
LIG1-215ENST00000597901 UNC5DQ6UXZ4 953 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 SYVN1Q86TM6 617 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 SLC35F6Q8N357 371 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 C2orf73Q8N5S3 287 aaPredicted RBP14.55□□□□□ -0.08
LIG1-215ENST00000597901 OTUD6BQ8N6M0 293 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 C19orf47Q8N9M1 422 aaKnown RBP14.55□□□□□ -0.08
LIG1-215ENST00000597901 LMNTD1Q8N9Z9 388 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 C9orf43Q8TAL5 461 aaPredicted RBP14.55□□□□□ -0.08
LIG1-215ENST00000597901 COG1Q8WTW3 980 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 SEC14L1Q92503 715 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 BIRC8Q96P09 236 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 NAP1L3Q99457 506 aaPredicted RBP14.55□□□□□ -0.08
LIG1-215ENST00000597901 MENTQ9BUN1 341 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 SLC7A5P2Q9GIP4 190 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 SPRTNQ9H040 489 aaPredicted RBP14.55□□□□□ -0.08
LIG1-215ENST00000597901 CIDEBQ9UHD4 219 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 GNPTGQ9UJJ9 305 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 A0A0J9YY10 115 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 ZSCAN12O43309 604 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 CAPN1P07384 714 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 HBQ1P09105 142 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 RAB40ALP0C0E4 278 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 MLNP12872 115 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 PKLRP30613 574 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 TMED2Q15363 201 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 UGT8Q16880 541 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 CTSL3PQ5NE16 218 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 KIAA0930Q6ICG6 404 aaPredicted RBP14.54□□□□□ -0.08
LIG1-215ENST00000597901 NEPROQ6NW34 567 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 CASC4Q6P4E1 433 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 TTC23LQ6PF05 361 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 OTOAQ7RTW8 1153 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 FAM20CQ8IXL6 584 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 GPR135Q8IZ08 494 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 DNAJC22Q8N4W6 341 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 LINC01555Q8NAE3 123 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 MCUQ8NE86 351 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 GSDMBQ8TAX9 411 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 THAP4Q8WY91 577 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 LPGAT1Q92604 370 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 N4BP2L2Q92802 583 aaPredicted RBP14.54□□□□□ -0.08
LIG1-215ENST00000597901 IL17FQ96PD4 163 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 OSBPL9Q96SU4 736 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 NLNQ9BYT8 704 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 SLC39A10Q9ULF5 831 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 CRYL1Q9Y2S2 319 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 COL6A6A6NMZ7 2263 aa14.54□□□□□ -0.08
LIG1-215ENST00000597901 FAM237BA0A1B0GVD1 139 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 H3BMH7 237 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 PGRMC1O00264 195 aaKnown RBP14.53□□□□□ -0.08
LIG1-215ENST00000597901 PFDN6O15212 129 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 OR2B3O76000 313 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 CTSBP07858 339 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 CSRP3P50461 194 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 TYSND1Q2T9J0 566 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 PTCHD3Q3KNS1 767 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 ANKRD20A4Q4UJ75 823 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 CENPUQ71F23 418 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 APLFQ8IW19 511 aaPredicted RBP14.53□□□□□ -0.08
LIG1-215ENST00000597901 DCUN1D3Q8IWE4 304 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 SYTL1Q8IYJ3 562 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 ENDOVQ8N8Q3 282 aaKnown RBP14.53□□□□□ -0.08
LIG1-215ENST00000597901 OR2L8Q8NGY9 312 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 ACTRT1Q8TDG2 376 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 RAD51AP1Q96B01 352 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 SLC22A18Q96BI1 424 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 TRIM56Q9BRZ2 755 aaKnown RBP14.53□□□□□ -0.08
LIG1-215ENST00000597901 TRMT1Q9NXH9 659 aaKnown RBP14.53□□□□□ -0.08
LIG1-215ENST00000597901 TLK1Q9UKI8 766 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 PLCL2Q9UPR0 1127 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 MAN2B2Q9Y2E5 1009 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 KLHL20Q9Y2M5 609 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 NFS1Q9Y697 457 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 AP1M2Q9Y6Q5 423 aa14.53□□□□□ -0.08
LIG1-215ENST00000597901 H3BMM5 538 aa14.52□□□□□ -0.09
LIG1-215ENST00000597901 MKRN2OSH3BPM6 223 aa14.52□□□□□ -0.09
LIG1-215ENST00000597901 GOLGA8MH3BSY2 632 aa14.52□□□□□ -0.09
LIG1-215ENST00000597901 K7EM74 188 aa14.52□□□□□ -0.09
LIG1-215ENST00000597901 RASGRF2O14827 1237 aa14.52□□□□□ -0.09
LIG1-215ENST00000597901 PRICKLE3O43900 615 aaPredicted RBP14.52□□□□□ -0.09
LIG1-215ENST00000597901 TMEM63AO94886 807 aa14.52□□□□□ -0.09
LIG1-215ENST00000597901 C1orf105O95561 183 aa14.52□□□□□ -0.09
LIG1-215ENST00000597901 S1PR4O95977 384 aa14.52□□□□□ -0.09
LIG1-215ENST00000597901 ESR1P03372 595 aa14.52□□□□□ -0.09
LIG1-215ENST00000597901 CBSLP0DN79 551 aa14.52□□□□□ -0.09
LIG1-215ENST00000597901 PAMP19021 973 aa14.52□□□□□ -0.09
LIG1-215ENST00000597901 CHRM3P20309 590 aa14.52□□□□□ -0.09
LIG1-215ENST00000597901 AGXTP21549 392 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms