RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 E7ENX8 843 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 SLC16A5O15375 505 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 TAPBPO15533 448 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 CPNE6O95741 557 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 SLC16A8O95907 504 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 MT-CO3P00414 261 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 INHBAP08476 426 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 SNRPAP09012 282 aaKnown RBP10.24□□□□□ -0.77
LIG1-210ENST00000596332 MTHFD2P13995 350 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 MPSTP25325 297 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 IMPA1P29218 277 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 CRABP2P29373 138 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 SLC26A3P40879 764 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 SLCO1A2P46721 670 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 CAPZBP47756 277 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 SERPINB9P50453 376 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 KPNA2P52292 529 aaKnown RBP10.24□□□□□ -0.77
LIG1-210ENST00000596332 GPLD1P80108 840 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 TAP2Q03519 686 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 ZNF844Q08AG5 666 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 TSNQ15631 228 aaKnown RBP10.24□□□□□ -0.77
LIG1-210ENST00000596332 ISXQ2M1V0 245 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 AMZ1Q400G9 498 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 HES3Q5TGS1 186 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 TMEM71Q6P5X7 295 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 FBXO38Q6PIJ6 1188 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 UBE2R2Q712K3 238 aaPredicted RBP10.24□□□□□ -0.77
LIG1-210ENST00000596332 AMIGO1Q86WK6 493 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 TRIM48Q8IWZ4 208 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 NKAPQ8N5F7 415 aaKnown RBP10.24□□□□□ -0.77
LIG1-210ENST00000596332 AVL9Q8NBF6 648 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 OR9A1PQ8NGU1 263 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 ZNF480Q8WV37 535 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 KCTD4Q8WVF5 259 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 RAD51AP1Q96B01 352 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 PRR11Q96HE9 360 aaPredicted RBP10.24□□□□□ -0.77
LIG1-210ENST00000596332 OR2A14Q96R47 310 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 ATOH8Q96SQ7 321 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 PARVBQ9HBI1 364 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 SYTL2Q9HCH5 934 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 TXNDC16Q9P2K2 825 aa10.24□□□□□ -0.77
LIG1-210ENST00000596332 NOVA2Q9UNW9 492 aaKnown RBP10.24□□□□□ -0.77
LIG1-210ENST00000596332 APOBEC2Q9Y235 224 aaKnown RBP10.24□□□□□ -0.77
LIG1-210ENST00000596332 TDRKHQ9Y2W6 561 aaKnown RBP10.24□□□□□ -0.77
LIG1-210ENST00000596332 MN1Q10571 1320 aaPredicted RBP10.24□□□□□ -0.77
LIG1-210ENST00000596332 WDFY3Q8IZQ1 3526 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 PTPRBP23467 1997 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 IGHV5-51A0A0C4DH38 117 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 FAM149AA5PLN7 773 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 NPEPPSL1A6NEC2 478 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 HYAL3O43820 417 aaPredicted RBP10.23□□□□□ -0.77
LIG1-210ENST00000596332 PRAMEF10O60809 474 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 CHRM5P08912 532 aaPredicted RBP10.23□□□□□ -0.77
LIG1-210ENST00000596332 THRAP10827 490 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 CDK4P11802 303 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 POLR2CP19387 275 aaPredicted RBP10.23□□□□□ -0.77
LIG1-210ENST00000596332 SPINK2P20155 84 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 CNTFP26441 200 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 TYK2P29597 1187 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 PRDX3P30048 256 aaKnown RBP10.23□□□□□ -0.77
LIG1-210ENST00000596332 CCNFP41002 786 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 RAB28P51157 221 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 CSHL1Q14406 222 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 C16orf72Q14CZ0 275 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 ZIC1Q15915 447 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 CLPPQ16740 277 aaPredicted RBP10.23□□□□□ -0.77
LIG1-210ENST00000596332 C18orf21Q32NC0 220 aaPredicted RBP10.23□□□□□ -0.77
LIG1-210ENST00000596332 CCDC157Q569K6 752 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 CDHR3Q6ZTQ4 885 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 TMPRSS12Q86WS5 348 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 FAM20CQ8IXL6 584 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 C2orf73Q8N5S3 287 aaPredicted RBP10.23□□□□□ -0.77
LIG1-210ENST00000596332 OR4D9Q8NGE8 314 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 OR2A1Q8NGT9 310 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 OR2L8Q8NGY9 312 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 LCN9Q8WX39 176 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 NCSTNQ92542 709 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 KIAA1191Q96A73 305 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 TSPAN17Q96FV3 270 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 ZIM3Q96PE6 472 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 GFM1Q96RP9 751 aaKnown RBP10.23□□□□□ -0.77
LIG1-210ENST00000596332 PITPNM3Q9BZ71 974 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 SRMSQ9H3Y6 488 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 SYNPO2LQ9H987 977 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 HRASLS2Q9NWW9 162 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 STOX2Q9P2F5 926 aaPredicted RBP10.23□□□□□ -0.77
LIG1-210ENST00000596332 PSMC3IPQ9P2W1 217 aaPredicted RBP10.23□□□□□ -0.77
LIG1-210ENST00000596332 TBK1Q9UHD2 729 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 LGALS13Q9UHV8 139 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 PLAAQ9Y263 795 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 ACOT9Q9Y305 439 aa10.23□□□□□ -0.77
LIG1-210ENST00000596332 IGKV1-8A0A0C4DH67 115 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 AGPSO00116 658 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 CAPN5O15484 640 aaPredicted RBP10.22□□□□□ -0.77
LIG1-210ENST00000596332 HCRTR1O43613 425 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 KLK8O60259 260 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 KRT38O76015 456 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 KLHL2O95198 593 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 CAPNS1P04632 268 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 C8GP07360 202 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms