RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 PRB1P04280 392 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 PKMP14618 531 aaKnown RBP12.61□□□□□ -0.39
USE1-207ENST00000596136 PVRP15151 417 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 CD9P21926 228 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 PEBP1P30086 187 aaKnown RBP12.61□□□□□ -0.39
USE1-207ENST00000596136 GABRA4P48169 554 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 MC1RQ01726 317 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 LY6DQ14210 128 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 ZIC1Q15915 447 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 LONRF1Q17RB8 773 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 SLC5A12Q1EHB4 618 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 ZNF470Q6ECI4 717 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 CDHR3Q6ZTQ4 885 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 ZNF843Q8N446 348 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 OTUD6BQ8N6M0 293 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 LINC01555Q8NAE3 123 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 SLC38A9Q8NBW4 561 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 OR2L8Q8NGY9 312 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 CALML6Q8TD86 181 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 TCTN2Q96GX1 697 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 AKIRIN1Q9H9L7 192 aaPredicted RBP12.61□□□□□ -0.39
USE1-207ENST00000596136 FANCEQ9HB96 536 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 IL1RAPL1Q9NZN1 696 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 ASIC3Q9UHC3 531 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 KCND3Q9UK17 655 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 CROTQ9UKG9 612 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 CRYL1Q9Y2S2 319 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 MED16Q9Y2X0 877 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 MRFAP1Q9Y605 127 aa12.61□□□□□ -0.39
USE1-207ENST00000596136 A0A0J9YY10 115 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 C21orf140B9A014 251 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 CCDC188H7C350 402 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 SMAPO00193 183 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 RASGRF2O14827 1237 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 NKX2-8O15522 239 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 MAP3K7O43318 606 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 PRICKLE3O43900 615 aaPredicted RBP12.6□□□□□ -0.39
USE1-207ENST00000596136 NIPSNAP2O75323 286 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 SCRG1O75711 98 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 C1orf105O95561 183 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 TTC4O95801 387 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 NTRK1P04629 796 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 DLSTP36957 453 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 CCNFP41002 786 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 CLCN7P51798 805 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 CDC20Q12834 499 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 CBLBQ13191 982 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 CTBP1Q13363 440 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 THOC5Q13769 683 aaKnown RBP12.6□□□□□ -0.39
USE1-207ENST00000596136 MORF4L2Q15014 288 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 MSS51Q4VC12 460 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 ZNF549Q6P9A3 640 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 DENND6AQ8IWF6 608 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 C19orf47Q8N9M1 422 aaKnown RBP12.6□□□□□ -0.39
USE1-207ENST00000596136 OR1L3Q8NH93 324 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 CFAP61Q8NHU2 1237 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 GSDMBQ8TAX9 411 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 HMGCLL1Q8TB92 370 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 STARD8Q92502 1023 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 RAD51AP1Q96B01 352 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 SLC22A18Q96BI1 424 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 CAPZA3Q96KX2 299 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 EBNA1BP2Q99848 306 aaKnown RBP12.6□□□□□ -0.39
USE1-207ENST00000596136 NAT9Q9BTE0 207 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 GPR87Q9BY21 358 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 FAM60AQ9NP50 221 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 ENAMQ9NRM1 1142 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 GALPQ9UBC7 116 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 SERTAD3Q9UJW9 196 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 PLAGL1Q9UM63 463 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 NFS1Q9Y697 457 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 MAD1L1Q9Y6D9 718 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 PCM1Q15154 2024 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 ZNF462Q96JM2 2506 aa12.6□□□□□ -0.39
USE1-207ENST00000596136 HELZ2Q9BYK8 2649 aaKnown RBP12.59□□□□□ -0.39
USE1-207ENST00000596136 TMEM150CB9EJG8 249 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 TP73O15350 636 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 FKBP9O95302 570 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 PGAM1P18669 254 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 TCN2P20062 427 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 CHRM3P20309 590 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 OAS2P29728 719 aaKnown RBP12.59□□□□□ -0.39
USE1-207ENST00000596136 RORAP35398 523 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 SLC1A2P43004 574 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 DR1Q01658 176 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 DHX9Q08211 1270 aaKnown RBP12.59□□□□□ -0.39
USE1-207ENST00000596136 C19orf57Q0VDD7 668 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 GPS2Q13227 327 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 DNASE1L3Q13609 305 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 CRYMQ14894 314 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 IZUMO3Q5VZ72 239 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 HIBCHQ6NVY1 386 aaPredicted RBP12.59□□□□□ -0.39
USE1-207ENST00000596136 TTC23LQ6PF05 361 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 BORAQ6PGQ7 559 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 NEK10Q6ZWH5 1172 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 TRIM73Q86UV7 250 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 TMEM126BQ8IUX1 230 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 DNAJC22Q8N4W6 341 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 ZBTB2Q8N680 514 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms