RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 CHRM5P08912 532 aaPredicted RBP10.79□□□□□ -0.68
VRK3-210ENST00000596121 ST6GAL1P15907 406 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 UGT2B7P16662 529 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 ATP5DP30049 168 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 SSTR1P30872 391 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 GPX6P59796 221 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 GUCY2DQ02846 1103 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 FOXM1Q08050 763 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 GPR19Q15760 415 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 ZIC1Q15915 447 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 KLHL38Q2WGJ6 581 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 DCAF12Q5T6F0 453 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 UBAP2Q5T6F2 1119 aaKnown RBP10.79□□□□□ -0.68
VRK3-210ENST00000596121 KCNJ9Q92806 393 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 INPP5DQ92835 1189 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 TRAPPC9Q96Q05 1148 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 CD180Q99467 661 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 MCMBPQ9BTE3 642 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 CPNE5Q9HCH3 593 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 PPANQ9NQ55 473 aaKnown RBP10.79□□□□□ -0.68
VRK3-210ENST00000596121 PILRAQ9UKJ1 303 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 KLHL20Q9Y2M5 609 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 UTP11Q9Y3A2 253 aaKnown RBP10.79□□□□□ -0.68
VRK3-210ENST00000596121 SPTBP11277 2137 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 LOC400499M0QZD8 3231 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 PIPSLA2A3N6 862 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 ARHGEF33A8MVX0 844 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 CXorf49A8MYA2 514 aaPredicted RBP10.78□□□□□ -0.68
VRK3-210ENST00000596121 C2orf74A8MZ97 194 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.78□□□□□ -0.68
VRK3-210ENST00000596121 E5RI56 91 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 RASGRF2O14827 1237 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 RRP8O43159 456 aaKnown RBP10.78□□□□□ -0.68
VRK3-210ENST00000596121 PRICKLE3O43900 615 aaPredicted RBP10.78□□□□□ -0.68
VRK3-210ENST00000596121 PSIP1O75475 530 aaKnown RBP10.78□□□□□ -0.68
VRK3-210ENST00000596121 CTSBP07858 339 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 LIPCP11150 499 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 FGF5P12034 268 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 CD9P21926 228 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 CDH3P22223 829 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 SHMT2P34897 504 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 YBX1P67809 324 aaKnown RBP10.78□□□□□ -0.68
VRK3-210ENST00000596121 HSD11B2P80365 405 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 PRKAA1Q13131 559 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 CALCOCO2Q13137 446 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 FASTKQ14296 549 aaKnown RBP10.78□□□□□ -0.68
VRK3-210ENST00000596121 TMEM164Q5U3C3 297 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 PRAMEF17Q5VTA0 474 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 PWWP2BQ6NUJ5 590 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 ARMC6Q6NXE6 501 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 C8orf74Q6P047 294 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 SPESP1Q6UW49 350 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 KIAA0408Q6ZU52 694 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 PIWIL4Q7Z3Z4 852 aaKnown RBP10.78□□□□□ -0.68
VRK3-210ENST00000596121 GALNT7Q86SF2 657 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 VASH2Q86V25 355 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 TAX1BP1Q86VP1 789 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 DCUN1D3Q8IWE4 304 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 CPNE9Q8IYJ1 553 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 LRRN4CLQ8ND94 238 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 GSDMBQ8TAX9 411 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 PYROXD1Q8WU10 500 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 EEF1AKMT1Q8WVE0 214 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 SKA2Q8WVK7 121 aaPredicted RBP10.78□□□□□ -0.68
VRK3-210ENST00000596121 DLG3Q92796 817 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 NKD1Q969G9 470 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 TRIM44Q96DX7 344 aaPredicted RBP10.78□□□□□ -0.68
VRK3-210ENST00000596121 OLFM1Q99784 485 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 ASPSCR1Q9BZE9 553 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 DPH1Q9BZG8 443 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 RAB17Q9H0T7 212 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 PRORYQ9H606 182 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 FAM60AQ9NP50 221 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 OR6C2Q9NZP2 312 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 KLHL42Q9P2K6 505 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 BTRCQ9Y297 605 aa10.78□□□□□ -0.68
VRK3-210ENST00000596121 SNRNP200O75643 2136 aaKnown RBP10.78□□□□□ -0.68
VRK3-210ENST00000596121 A0A1W2PPV9 198 aa10.77□□□□□ -0.69
VRK3-210ENST00000596121 EIF3HO15372 352 aaKnown RBP eCLIP10.77□□□□□ -0.69
VRK3-210ENST00000596121 SPAG6O75602 509 aa10.77□□□□□ -0.69
VRK3-210ENST00000596121 ZBTB11O95625 1053 aaPredicted RBP10.77□□□□□ -0.69
VRK3-210ENST00000596121 TSPAN12O95859 305 aa10.77□□□□□ -0.69
VRK3-210ENST00000596121 DLGAP3O95886 979 aa10.77□□□□□ -0.69
VRK3-210ENST00000596121 TUBB4AP04350 444 aa10.77□□□□□ -0.69
VRK3-210ENST00000596121 MCM3P25205 808 aa10.77□□□□□ -0.69
VRK3-210ENST00000596121 GABRA4P48169 554 aa10.77□□□□□ -0.69
VRK3-210ENST00000596121 RAB28P51157 221 aa10.77□□□□□ -0.69
VRK3-210ENST00000596121 RAB15P59190 212 aa10.77□□□□□ -0.69
VRK3-210ENST00000596121 MGAT5Q09328 741 aa10.77□□□□□ -0.69
VRK3-210ENST00000596121 COL9A2Q14055 689 aaPredicted RBP10.77□□□□□ -0.69
VRK3-210ENST00000596121 HECTD2Q5U5R9 776 aa10.77□□□□□ -0.69
VRK3-210ENST00000596121 PAQR3Q6TCH7 311 aa10.77□□□□□ -0.69
VRK3-210ENST00000596121 TMEM207Q6UWW9 146 aa10.77□□□□□ -0.69
VRK3-210ENST00000596121 CEACAM20Q6UY09 585 aa10.77□□□□□ -0.69
VRK3-210ENST00000596121 LRRC69Q6ZNQ3 347 aa10.77□□□□□ -0.69
VRK3-210ENST00000596121 CDHR3Q6ZTQ4 885 aa10.77□□□□□ -0.69
VRK3-210ENST00000596121 KMT5CQ86Y97 462 aa10.77□□□□□ -0.69
VRK3-210ENST00000596121 OR2L8Q8NGY9 312 aa10.77□□□□□ -0.69
VRK3-210ENST00000596121 ASB11Q8WXH4 323 aa10.77□□□□□ -0.69
VRK3-210ENST00000596121 RAD51AP1Q96B01 352 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms