RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 CFAP47Q6ZTR5 3102 aa14.1□□□□□ -0.15
VRK3-206ENST00000594090 KRT87PA6NCN2 255 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.09□□□□□ -0.15
VRK3-206ENST00000594090 RASGRF2O14827 1237 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 KLK10O43240 276 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 PSIP1O75475 530 aaKnown RBP14.09□□□□□ -0.15
VRK3-206ENST00000594090 EBLN1P0CF75 366 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 CBSLP0DN79 551 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 ENO3P13929 434 aaPredicted RBP14.09□□□□□ -0.15
VRK3-206ENST00000594090 UGT2B7P16662 529 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 PEBP1P30086 187 aaKnown RBP14.09□□□□□ -0.15
VRK3-206ENST00000594090 SSTR1P30872 391 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 CBSP35520 551 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 CCNFP41002 786 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 ARL4DP49703 201 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 HSD11B2P80365 405 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 TIAL1Q01085 375 aaKnown RBP eCLIP14.09□□□□□ -0.15
VRK3-206ENST00000594090 GUCY2DQ02846 1103 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 TLE3Q04726 772 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 KCNAB1Q14722 419 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 UGT3A1Q6NUS8 523 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 SPESP1Q6UW49 350 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 CCDC25Q86WR0 208 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 PALM2Q8IXS6 379 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 CPNE9Q8IYJ1 553 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 D2HGDHQ8N465 521 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 LINC01555Q8NAE3 123 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 MAGEC3Q8TD91 643 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 HNRNPLLQ8WVV9 542 aaKnown RBP14.09□□□□□ -0.15
VRK3-206ENST00000594090 INPP5DQ92835 1189 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 IL17FQ96PD4 163 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 OR2A14Q96R47 310 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 RAB11FIP5Q9BXF6 653 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 ZDHHC18Q9NUE0 388 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 SOHLH2Q9NX45 425 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 SPHK1Q9NYA1 384 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 TAS2R13Q9NYV9 303 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 TRMT6Q9UJA5 497 aaKnown RBP14.09□□□□□ -0.15
VRK3-206ENST00000594090 BTRCQ9Y297 605 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 PSAT1Q9Y617 370 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 ZZEF1O43149 2961 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 SDK2Q58EX2 2172 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 ACACAQ13085 2346 aa14.09□□□□□ -0.15
VRK3-206ENST00000594090 SLC9B1P1A6NJY1 282 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 ARHGEF33A8MVX0 844 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 STMND1H3BQB6 276 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 EIF3FO00303 357 aaPredicted RBP14.08□□□□□ -0.15
VRK3-206ENST00000594090 MPC1LP0DKB6 136 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 FOLR1P15328 257 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 ST6GAL1P15907 406 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 CDKN2DP55273 166 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 TUBB3Q13509 450 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 IL11RAQ14626 422 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 TGIF1Q15583 401 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 CCSMST1Q4G0I0 132 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.08□□□□□ -0.15
VRK3-206ENST00000594090 FAM45BPQ6NSW5 357 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 CYB5D1Q6P9G0 228 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 SLC26A11Q86WA9 606 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 DTX1Q86Y01 620 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 CEP112Q8N8E3 955 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 GPATCH11Q8N954 259 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 OR2L8Q8NGY9 312 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 FLVCR1-AS1Q8TAF5 88 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 FAM45AQ8TCE6 357 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 NSMCE4AQ9NXX6 385 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 DMGDHQ9UI17 866 aaKnown RBP14.08□□□□□ -0.15
VRK3-206ENST00000594090 SLC39A10Q9ULF5 831 aa14.08□□□□□ -0.15
VRK3-206ENST00000594090 URB1O60287 2271 aaKnown RBP14.08□□□□□ -0.16
VRK3-206ENST00000594090 ISM1B1AKI9 464 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 CATP04040 527 aaKnown RBP14.07□□□□□ -0.16
VRK3-206ENST00000594090 GSTA2P09210 222 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 FGF5P12034 268 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 PVRP15151 417 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 CD9P21926 228 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 MCM3P25205 808 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 SKIV2L2P42285 1042 aaKnown RBP14.07□□□□□ -0.16
VRK3-206ENST00000594090 MAGEA4P43358 317 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 ACY1Q03154 408 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 KIR2DS3Q14952 304 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 SLC5A12Q1EHB4 618 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 COL28A1Q2UY09 1125 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 GLE1Q53GS7 698 aaKnown RBP14.07□□□□□ -0.16
VRK3-206ENST00000594090 HECTD2Q5U5R9 776 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 BROXQ5VW32 411 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 C19orf48Q6RUI8 117 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 PIWIL4Q7Z3Z4 852 aaKnown RBP14.07□□□□□ -0.16
VRK3-206ENST00000594090 STRA8Q7Z7C7 330 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 TRIM73Q86UV7 250 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 TAX1BP1Q86VP1 789 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 RAB42Q8N4Z0 105 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 C2orf73Q8N5S3 287 aaPredicted RBP14.07□□□□□ -0.16
VRK3-206ENST00000594090 LMNTD1Q8N9Z9 388 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 DENND1AQ8TEH3 1009 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 TRAPPC9Q96Q05 1148 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 SMYD2Q9NRG4 433 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 FAM114A2Q9NRY5 505 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 FGF21Q9NSA1 209 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 SPATA7Q9P0W8 599 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 SSUH2Q9Y2M2 353 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms