RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 NDUFA13Q9P0J0 144 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 ATXN10Q9UBB4 475 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 COPG2Q9UBF2 871 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 OR14J1Q9UGF5 321 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 AMACRQ9UHK6 382 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 ACSL5Q9ULC5 683 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 STK38LQ9Y2H1 464 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 R3HDM2Q9Y2K5 976 aaKnown RBP3.39□□□□□ -1.87
VMP1-212ENST00000591782 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.39□□□□□ -1.87
VMP1-212ENST00000591782 TCF20Q9UGU0 1960 aaKnown RBP3.39□□□□□ -1.87
VMP1-212ENST00000591782 PDS5AQ29RF7 1337 aaKnown RBP3.39□□□□□ -1.87
VMP1-212ENST00000591782 MROH5Q6ZUA9 1318 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 WDR81Q562E7 1941 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 GREB1LQ9C091 1923 aaPredicted RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 KIF15Q9NS87 1388 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 TNIKQ9UKE5 1360 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 PDS5BQ9NTI5 1447 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 FRMD3A2A2Y4 597 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 DENND3A2RUS2 1198 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 PRAC2D3DTV9 90 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 H3BQ06 376 aaPredicted RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 L7N2F9 121 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 M0QZ24 198 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 CAPN9O14815 690 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 HAT1O14929 419 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 ATP2A1O14983 1001 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 PTP4A3O75365 173 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 SLITRK3O94933 977 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 KCNK5O95279 499 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 APOEP02649 317 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 ALOX5P09917 674 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 PNMA6AP0CW24 399 aaPredicted RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 HLA-DOBP13765 273 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 MYOD1P15172 320 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 PDGFRAP16234 1089 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 TMEM11P17152 192 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 UBA1P22314 1058 aaKnown RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 MAPK3P27361 379 aaPredicted RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 PBLDP30039 288 aaPredicted RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 TM4SF1P30408 202 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 PRKAR2BP31323 418 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 SOX6P35712 828 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 APOBEC1P41238 236 aaKnown RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 PRCPP42785 496 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 MTIF2P46199 727 aaKnown RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 HSPA13P48723 471 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 GAS1P54826 345 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 PLTPP55058 493 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 TAS2R38P59533 333 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 TAS2R40P59535 323 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 ERVFC1-1P60608 527 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 ARF3P61204 181 aaPredicted RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 ARF1P84077 181 aaKnown RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 CDC16Q13042 620 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 MSLNQ13421 630 aaPredicted RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 ITGA7Q13683 1181 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 GNA13Q14344 377 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 CASP8Q14790 479 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 NAB2Q15742 525 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 ADIPOQQ15848 244 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 PNLIPRP3Q17RR3 467 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 Q3ZCU0 254 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 CEP55Q53EZ4 464 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 SOWAHCQ53LP3 525 aaPredicted RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 FBXO48Q5FWF7 155 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 DCST1Q5T197 706 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 PLBD1Q6P4A8 553 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 UNQ6126/PRO20091Q6UXV3 157 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 C18orf65Q6ZTR6 163 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 SFR1Q86XK3 245 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 TMEM219Q86XT9 240 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 GALNT13Q8IUC8 556 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 SYCP3Q8IZU3 236 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 C1orf87Q8N0U7 546 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 ARHGAP18Q8N392 663 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 PPFIBP2Q8ND30 876 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 ACVR1CQ8NER5 493 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 ENKURQ8TC29 256 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 SLC22A8Q8TCC7 542 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 ATP8B4Q8TF62 1192 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 SCFD2Q8WU76 684 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 SECTM1Q8WVN6 248 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 SORCS1Q8WY21 1168 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 POMGNT1Q8WZA1 660 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 ABTB1Q969K4 478 aaPredicted RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 ELMOD3Q96FG2 381 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 CCDC42Q96M95 316 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 CMTM3Q96MX0 182 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 NUDCD1Q96RS6 583 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 SEPT5Q99719 369 aaPredicted RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 HNRNPABQ99729 332 aaKnown RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 JPH2Q9BR39 696 aaPredicted RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 CENPOQ9BU64 300 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 CCDC106Q9BWC9 280 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 MOV10L1Q9BXT6 1211 aaKnown RBP3.38□□□□□ -1.87
VMP1-212ENST00000591782 PARD6BQ9BYG5 372 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 FTOQ9C0B1 505 aaKnown RBP eCLIP3.38□□□□□ -1.87
VMP1-212ENST00000591782 NYXQ9GZU5 481 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 CSTL1Q9H114 145 aa3.38□□□□□ -1.87
VMP1-212ENST00000591782 SIL1Q9H173 461 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms