RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 CFAP61Q8NHU2 1237 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 SLC29A3Q9BZD2 475 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 TUBB1Q9H4B7 451 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 LMAN1LQ9HAT1 526 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 DNAJC11Q9NVH1 559 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 KANSL1LA0AUZ9 987 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 MYO1CO00159 1063 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 TOR1BO14657 336 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 FPGTO14772 594 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 UBDO15205 165 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 LATO43561 262 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 GALR2O43603 387 aaPredicted RBP11.75□□□□□ -0.53
CCBE1-203ENST00000589116 SEMA4FO95754 770 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 RPN2P04844 631 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 CAPN1P07384 714 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 HGFP14210 728 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 KELP23276 732 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 ACADLP28330 430 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 HMOX2P30519 316 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 OXTRP30559 389 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 BDKRB1P46663 353 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 SQLEQ14534 574 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 NAA25Q14CX7 972 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 HERC3Q15034 1050 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 METRNLQ641Q3 311 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 OGFOD2Q6N063 350 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 PGBD3Q8N328 593 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 CDYL2Q8N8U2 506 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 METTL6Q8TCB7 284 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 SCARF2Q96GP6 870 aaPredicted RBP11.75□□□□□ -0.53
CCBE1-203ENST00000589116 CATSPER2Q96P56 530 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 CD93Q9NPY3 652 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 RIC8BQ9NVN3 520 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 STOX2Q9P2F5 926 aaPredicted RBP11.75□□□□□ -0.53
CCBE1-203ENST00000589116 EBF1Q9UH73 591 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 FBXL21Q9UKT6 434 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 ACSL5Q9ULC5 683 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 TIMM22Q9Y584 194 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 PCYT1BQ9Y5K3 369 aaPredicted RBP11.75□□□□□ -0.53
CCBE1-203ENST00000589116 KRBA1A5PL33 1030 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 H0YHG0 523 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 UGDHO60701 494 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 CLDN9O95484 217 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 CEACAM5P06731 702 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 PRR35P0CG20 571 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 NQO1P15559 274 aaKnown RBP11.74□□□□□ -0.53
CCBE1-203ENST00000589116 LBPP18428 481 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 NUDT1P36639 197 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 CCR5P51681 352 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 UBXN2BQ14CS0 331 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 TMEM198Q66K66 360 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 AGTRAPQ6RW13 159 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 FAM83HQ6ZRV2 1179 aaPredicted RBP11.74□□□□□ -0.53
CCBE1-203ENST00000589116 GALNT13Q8IUC8 556 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 SNX31Q8N9S9 440 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 FLCNQ8NFG4 579 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 TSTD1Q8NFU3 115 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 OR56A3Q8NH54 315 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 C3orf30Q96M34 536 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 CDK15Q96Q40 435 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 RAB3IPQ96QF0 476 aaPredicted RBP11.74□□□□□ -0.53
CCBE1-203ENST00000589116 PKP4Q99569 1192 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 ZDHHC5Q9C0B5 715 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 C1orf21Q9H246 121 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 AKTIPQ9H8T0 292 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 FZD3Q9NPG1 666 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.74□□□□□ -0.53
CCBE1-203ENST00000589116 SLC23A2Q9UGH3 650 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 POLG2Q9UHN1 485 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 ZNHIT2Q9UHR6 403 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 BTRCQ9Y297 605 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 PRKAB1Q9Y478 270 aa11.74□□□□□ -0.53
CCBE1-203ENST00000589116 COPG1Q9Y678 874 aaKnown RBP11.74□□□□□ -0.53
CCBE1-203ENST00000589116 FAM186AA6NE01 2351 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 IFRD1O00458 451 aaPredicted RBP11.73□□□□□ -0.53
CCBE1-203ENST00000589116 ZNF217O75362 1048 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 SLC16A8O95907 504 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 LINC00032P0C843 101 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 EZRP15311 586 aaKnown RBP11.73□□□□□ -0.53
CCBE1-203ENST00000589116 PIK3R1P27986 724 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 IMPA1P29218 277 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 AKT2P31751 481 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 PFN3P60673 137 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 YPEL5P62699 121 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 PCDH1Q08174 1060 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 NFATC4Q14934 902 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 ZXDCQ2QGD7 858 aaPredicted RBP11.73□□□□□ -0.53
CCBE1-203ENST00000589116 PYCR3Q53H96 274 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 DCUN1D3Q8IWE4 304 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 L3MBTL4Q8NA19 623 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 OR9A1PQ8NGU1 263 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 RP9Q8TA86 221 aaKnown RBP11.73□□□□□ -0.53
CCBE1-203ENST00000589116 RAD51AP1Q96B01 352 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 TUBGCP3Q96CW5 907 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 CNTNAP3BQ96NU0 1288 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 BTBD10Q9BSF8 475 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 CNTNAP3Q9BZ76 1288 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 ACTR8Q9H981 624 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 DCHS1Q96JQ0 3298 aa11.73□□□□□ -0.53
CCBE1-203ENST00000589116 ATP6AP2A0A1C7CYW4 349 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms