RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 K7EPI3 171 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 MYO1CO00159 1063 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 GDF5P43026 501 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 BLKP51451 505 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 ARFIP2P53365 341 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 AQP5P55064 265 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 SH3BP2P78314 561 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 ILF3Q12906 894 aaKnown RBP eCLIP21.66■■□□□ 1.06
ATG4D-209ENST00000588857 EIF2B5Q13144 721 aaKnown RBP21.66■■□□□ 1.06
ATG4D-209ENST00000588857 TCEA2Q15560 299 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 UAP1L1Q3KQV9 507 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 ARMCX6Q7L4S7 300 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 C11orf74Q86VG3 221 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 PARGQ86W56 976 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 ZBTB44Q8NCP5 570 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 OR5AR1Q8NGP9 310 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 OR9A1PQ8NGU1 263 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 OR5K2Q8NHB8 316 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 DNASE2BQ8WZ79 361 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 RAD51AP1Q96B01 352 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 PLCD4Q9BRC7 762 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 SLC32A1Q9H598 525 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 ZBTB26Q9HCK0 441 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 ZSCAN32Q9NX65 697 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 KCNK4Q9NYG8 393 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 STOX2Q9P2F5 926 aaPredicted RBP21.66■■□□□ 1.06
ATG4D-209ENST00000588857 VTI1BQ9UEU0 232 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 CIDEBQ9UHD4 219 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 STK38LQ9Y2H1 464 aa21.66■■□□□ 1.06
ATG4D-209ENST00000588857 CFAP20Q9Y6A4 193 aaKnown RBP21.66■■□□□ 1.06
ATG4D-209ENST00000588857 A0A1W2PR77 199 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 SLC16A8O95907 504 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 EPB42P16452 691 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 AK4P27144 223 aaPredicted RBP21.65■■□□□ 1.06
ATG4D-209ENST00000588857 ACTR1BP42025 376 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 HALP42357 657 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 ACTR1AP61163 376 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 PTCHD3Q3KNS1 767 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 AGTRAPQ6RW13 159 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 LRRC70Q7Z2Q7 622 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 C10orf82Q8WW14 230 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 ATP6V1E2Q96A05 226 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 FAR2Q96K12 515 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 INSM2Q96T92 566 aaPredicted RBP21.65■■□□□ 1.06
ATG4D-209ENST00000588857 ATG10Q9H0Y0 220 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 NOL11Q9H8H0 719 aaKnown RBP21.65■■□□□ 1.06
ATG4D-209ENST00000588857 PRDM8Q9NQV8 689 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 TDRKHQ9Y2W6 561 aaKnown RBP21.65■■□□□ 1.06
ATG4D-209ENST00000588857 PCDHGA2Q9Y5H1 932 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 ST14Q9Y5Y6 855 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 SPAG17Q6Q759 2223 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 TLR4O00206 839 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 PPP6CO00743 305 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 WDR47O94967 919 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 WNT1P04628 370 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 ARL1P40616 181 aaPredicted RBP21.65■■□□□ 1.06
ATG4D-209ENST00000588857 SLC6A12P48065 614 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 KRT33BQ14525 404 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 SLC30A9Q6PML9 568 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 TBC1D21Q8IYX1 336 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 AGAP11Q8TF27 550 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 FERD3LQ96RJ6 166 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 TMEM120AQ9BXJ8 343 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 IPPKQ9H8X2 491 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 KCNK13Q9HB14 408 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 IMP3Q9NV31 184 aaKnown RBP21.65■■□□□ 1.06
ATG4D-209ENST00000588857 TRAF6Q9Y4K3 522 aa21.65■■□□□ 1.06
ATG4D-209ENST00000588857 KNL1Q8NG31 2342 aa21.64■■□□□ 1.06
ATG4D-209ENST00000588857 TP53BP1Q12888 1972 aaPredicted RBP21.64■■□□□ 1.05
ATG4D-209ENST00000588857 MATN2O00339 956 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 HDAC3O15379 428 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 CRCPO75575 148 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 CTSEP14091 401 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 PKNOX1P55347 436 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 ZNF542PQ5EBM4 170 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 LAYNQ6UX15 382 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 WASH2PQ6VEQ5 465 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 GPRIN3Q6ZVF9 776 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 PHACTR4Q8IZ21 702 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 SNX31Q8N9S9 440 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 CCL4L1Q8NHW4 92 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 C1orf216Q8TAB5 229 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 GAB3Q8WWW8 586 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 SKA1Q96BD8 255 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 MED8Q96G25 268 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 ZNF382Q96SR6 550 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 GSDMCQ9BYG8 508 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 WASH6PQ9NQA3 447 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 DNAJC28Q9NX36 388 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 TBC1D29Q9UFV1 150 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 FIS1Q9Y3D6 152 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 HEBP2Q9Y5Z4 205 aa21.64■■□□□ 1.05
ATG4D-209ENST00000588857 ARHGEF17Q96PE2 2063 aaPredicted RBP21.63■■□□□ 1.05
ATG4D-209ENST00000588857 PCM1Q15154 2024 aa21.63■■□□□ 1.05
ATG4D-209ENST00000588857 TMEM233B4DJY2 109 aa21.63■■□□□ 1.05
ATG4D-209ENST00000588857 KATNA1O75449 491 aa21.63■■□□□ 1.05
ATG4D-209ENST00000588857 ESRRBO95718 433 aa21.63■■□□□ 1.05
ATG4D-209ENST00000588857 OTCP00480 354 aa21.63■■□□□ 1.05
ATG4D-209ENST00000588857 ALOX15P16050 662 aaPredicted RBP21.63■■□□□ 1.05
ATG4D-209ENST00000588857 IMPA1P29218 277 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms