RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 AOC1P19801 751 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 ITPKAP23677 461 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 RPS9P46781 194 aaKnown RBP11.1□□□□□ -0.63
SMAD4-205ENST00000588745 XKR7Q5GH72 579 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 TPRG1LQ5T0D9 272 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 TMEM198Q66K66 360 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 ENPP7Q6UWV6 458 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 MILR1Q7Z6M3 343 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 ABI3BPQ7Z7G0 1075 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 DCUN1D3Q8IWE4 304 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 HOMEZQ8IX15 550 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 GJD3Q8N144 294 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 SNX31Q8N9S9 440 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 OR9A1PQ8NGU1 263 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 TFGQ92734 400 aaPredicted RBP11.1□□□□□ -0.63
SMAD4-205ENST00000588745 PYCR2Q96C36 320 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 PTCD3Q96EY7 689 aaKnown RBP11.1□□□□□ -0.63
SMAD4-205ENST00000588745 CCT7Q99832 543 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 TUBB6Q9BUF5 446 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 ATG10Q9H0Y0 220 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 OSGEPL1Q9H4B0 414 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 ZNF385DQ9H6B1 395 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 CARS2Q9HA77 564 aaKnown RBP11.1□□□□□ -0.63
SMAD4-205ENST00000588745 PFDN4Q9NQP4 134 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 CIDEBQ9UHD4 219 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 MUTYHQ9UIF7 546 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 PSMD13Q9UNM6 376 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 KCNK6Q9Y257 313 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 ASF1AQ9Y294 204 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 GPSM3Q9Y4H4 160 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 PTGDR2Q9Y5Y4 395 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 CAPN7Q9Y6W3 813 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 LRP4O75096 1905 aa11.1□□□□□ -0.63
SMAD4-205ENST00000588745 STK25O00506 426 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 TNFRSF10CO14798 259 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 SLC22A2O15244 555 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 DCXO43602 365 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 VPS4BO75351 444 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 CLDN9O95484 217 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 T-ENOLP0DO92 83 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 CALB2P22676 271 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 HMOX2P30519 316 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 RABIFP47224 123 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 HTR6P50406 440 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 CLCNKAP51800 687 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 THOP1P52888 689 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 CORO7P57737 925 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 TBPL1P62380 186 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 ACTN3Q08043 901 aaPredicted RBP11.09□□□□□ -0.63
SMAD4-205ENST00000588745 MTAPQ13126 283 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 NAE1Q13564 534 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 GRB7Q14451 532 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 GGTA1PQ4G0N0 100 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 TCHHL1Q5QJ38 904 aaPredicted RBP11.09□□□□□ -0.63
SMAD4-205ENST00000588745 CAPRIN2Q6IMN6 1127 aaKnown RBP11.09□□□□□ -0.63
SMAD4-205ENST00000588745 CHSY3Q70JA7 882 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 LARP4Q71RC2 724 aaKnown RBP eCLIP11.09□□□□□ -0.63
SMAD4-205ENST00000588745 THOC6Q86W42 341 aaKnown RBP11.09□□□□□ -0.63
SMAD4-205ENST00000588745 CAMKK1Q8N5S9 505 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 FAM160A2Q8N612 972 aaPredicted RBP11.09□□□□□ -0.63
SMAD4-205ENST00000588745 CPSF7Q8N684 471 aaKnown RBP11.09□□□□□ -0.63
SMAD4-205ENST00000588745 FRMD1Q8N878 549 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 OR5AR1Q8NGP9 310 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 OR56A3Q8NH54 315 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 OR5K2Q8NHB8 316 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 METTL6Q8TCB7 284 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 ZNF480Q8WV37 535 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 RLN3Q8WXF3 142 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 OR1E3Q8WZA6 343 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 RAD51AP1Q96B01 352 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 BIRC7Q96CA5 298 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 NSL1Q96IY1 281 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 MAGEB10Q96LZ2 347 aaPredicted RBP11.09□□□□□ -0.63
SMAD4-205ENST00000588745 C3orf30Q96M34 536 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 CATSPER2Q96P56 530 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 IER2Q9BTL4 223 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 SLC29A3Q9BZD2 475 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 ACTR8Q9H981 624 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 MRGBPQ9NV56 204 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 KLQ9UEF7 1012 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 POLG2Q9UHN1 485 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 SLC22A14Q9Y267 594 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.09□□□□□ -0.63
SMAD4-205ENST00000588745 PLXND1Q9Y4D7 1925 aa11.09□□□□□ -0.63
SMAD4-205ENST00000588745 ATP6AP2A0A1C7CYW4 349 aa11.08□□□□□ -0.64
SMAD4-205ENST00000588745 A0A1W2PPC4 97 aa11.08□□□□□ -0.64
SMAD4-205ENST00000588745 ATP6AP2O75787 350 aa11.08□□□□□ -0.64
SMAD4-205ENST00000588745 DNAJC8O75937 253 aaPredicted RBP11.08□□□□□ -0.64
SMAD4-205ENST00000588745 LINC00032P0C843 101 aa11.08□□□□□ -0.64
SMAD4-205ENST00000588745 IDSP22304 550 aa11.08□□□□□ -0.64
SMAD4-205ENST00000588745 RPL10P27635 214 aaKnown RBP11.08□□□□□ -0.64
SMAD4-205ENST00000588745 LRP8Q14114 963 aa11.08□□□□□ -0.64
SMAD4-205ENST00000588745 SQLEQ14534 574 aa11.08□□□□□ -0.64
SMAD4-205ENST00000588745 GLIPR1L2Q4G1C9 344 aa11.08□□□□□ -0.64
SMAD4-205ENST00000588745 CAPN13Q6MZZ7 669 aaPredicted RBP11.08□□□□□ -0.64
SMAD4-205ENST00000588745 IL27RAQ6UWB1 636 aa11.08□□□□□ -0.64
SMAD4-205ENST00000588745 RNF165Q6ZSG1 346 aa11.08□□□□□ -0.64
SMAD4-205ENST00000588745 Q6ZSR6 202 aa11.08□□□□□ -0.64
SMAD4-205ENST00000588745 SYTL1Q8IYJ3 562 aa11.08□□□□□ -0.64
SMAD4-205ENST00000588745 L3MBTL4Q8NA19 623 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms