RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 BBS9Q3SYG4 887 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 DNAJC21Q5F1R6 531 aaKnown RBP8.56□□□□□ -1.04
SDF2-207ENST00000588472 CTSL3PQ5NE16 218 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 RNF187Q5TA31 235 aaPredicted RBP8.56□□□□□ -1.04
SDF2-207ENST00000588472 IZUMO3Q5VZ72 239 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 KIAA0930Q6ICG6 404 aaPredicted RBP8.56□□□□□ -1.04
SDF2-207ENST00000588472 TTC23LQ6PF05 361 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 SPESP1Q6UW49 350 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 CENPUQ71F23 418 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 LRRC6Q86X45 466 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 DENND6AQ8IWF6 608 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 AGGF1Q8N302 714 aaeCLIP8.56□□□□□ -1.04
SDF2-207ENST00000588472 NAT8LQ8N9F0 302 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 EXD3Q8N9H8 876 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 MCUQ8NE86 351 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 CT55Q8WUE5 264 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 STARD8Q92502 1023 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 LPGAT1Q92604 370 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 MR1Q95460 341 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 CLIP3Q96DZ5 547 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 PWWP2AQ96N64 755 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 TRAPPC9Q96Q05 1148 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 OR2A14Q96R47 310 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 RUFY1Q96T51 708 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 TCF12Q99081 682 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 EFHD1Q9BUP0 239 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 TUBB2BQ9BVA1 445 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 TRIM31Q9BZY9 425 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.56□□□□□ -1.04
SDF2-207ENST00000588472 SEMA5BQ9P283 1151 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 GALPQ9UBC7 116 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 SERTAD3Q9UJW9 196 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 HEMK1Q9Y5R4 338 aaPredicted RBP8.56□□□□□ -1.04
SDF2-207ENST00000588472 NFS1Q9Y697 457 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 ZNF462Q96JM2 2506 aa8.56□□□□□ -1.04
SDF2-207ENST00000588472 FAM237BA0A1B0GVD1 139 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 DNALI1O14645 258 aaPredicted RBP8.55□□□□□ -1.04
SDF2-207ENST00000588472 KPNA5O15131 536 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 SLCO2B1O94956 709 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 ESR1P03372 595 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 MT-ND3P03897 115 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 ERVK-10P10266 1014 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 PKMP14618 531 aaKnown RBP8.55□□□□□ -1.04
SDF2-207ENST00000588472 RPS3P23396 243 aaKnown RBP eCLIP8.55□□□□□ -1.045e-7■■□□□ 12.2
SDF2-207ENST00000588472 DEKP35659 375 aaKnown RBP8.55□□□□□ -1.04
SDF2-207ENST00000588472 PTGIRP43119 386 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 RAB28P51157 221 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 RPS18P62269 152 aaKnown RBP8.55□□□□□ -1.04
SDF2-207ENST00000588472 MPP1Q00013 466 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 DR1Q01658 176 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 DHX9Q08211 1270 aaKnown RBP8.55□□□□□ -1.04
SDF2-207ENST00000588472 DNASE1L3Q13609 305 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 TSTA3Q13630 321 aaPredicted RBP8.55□□□□□ -1.04
SDF2-207ENST00000588472 PTK6Q13882 451 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 MAP7Q14244 749 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 SF1Q15637 639 aaKnown RBP8.55□□□□□ -1.04
SDF2-207ENST00000588472 LONRF1Q17RB8 773 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 TYSND1Q2T9J0 566 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 CCSMST1Q4G0I0 132 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 HSP90AA5PQ58FG0 334 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 PLEKHS1Q5SXH7 462 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 RNASEH2BQ5TBB1 312 aaKnown RBP8.55□□□□□ -1.04
SDF2-207ENST00000588472 PAPD7Q5XG87 772 aaKnown RBP8.55□□□□□ -1.04
SDF2-207ENST00000588472 BORAQ6PGQ7 559 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 CDHR3Q6ZTQ4 885 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 BPHLQ86WA6 291 aaPredicted RBP8.55□□□□□ -1.04
SDF2-207ENST00000588472 CREG2Q8IUH2 290 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 CILP2Q8IUL8 1156 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 DCUN1D3Q8IWE4 304 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 ZBTB2Q8N680 514 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 C19orf47Q8N9M1 422 aaKnown RBP8.55□□□□□ -1.04
SDF2-207ENST00000588472 SLC38A9Q8NBW4 561 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 OR1L3Q8NH93 324 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 ZNF501Q96CX3 271 aaPredicted RBP8.55□□□□□ -1.04
SDF2-207ENST00000588472 CFAP36Q96G28 342 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 SLC45A3Q96JT2 553 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 SIGLEC10Q96LC7 697 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 FOPNLQ96NB1 174 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 BIRC8Q96P09 236 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 TRIM51Q9BSJ1 452 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 FAM117AQ9C073 453 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 CCDC68Q9H2F9 335 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 FAM60AQ9NP50 221 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 PPANQ9NQ55 473 aaKnown RBP8.55□□□□□ -1.04
SDF2-207ENST00000588472 LHX9Q9NQ69 397 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 IARS2Q9NSE4 1012 aaKnown RBP8.55□□□□□ -1.04
SDF2-207ENST00000588472 ABCF3Q9NUQ8 709 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 OR6C2Q9NZP2 312 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 BTRCQ9Y297 605 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 PCDHB3Q9Y5E6 796 aa8.55□□□□□ -1.04
SDF2-207ENST00000588472 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.55□□□□□ -1.04
SDF2-207ENST00000588472 MAST4O15021 2626 aa8.54□□□□□ -1.04
SDF2-207ENST00000588472 A0A0J9YY10 115 aa8.54□□□□□ -1.04
SDF2-207ENST00000588472 ZCWPW2A0A1B0GU75 182 aa8.54□□□□□ -1.04
SDF2-207ENST00000588472 CDC14CA4D256 554 aa8.54□□□□□ -1.04
SDF2-207ENST00000588472 H3BMM5 538 aa8.54□□□□□ -1.04
SDF2-207ENST00000588472 TTI1O43156 1089 aa8.54□□□□□ -1.04
SDF2-207ENST00000588472 ZNF749O43361 778 aa8.54□□□□□ -1.04
SDF2-207ENST00000588472 HCRTR1O43613 425 aa8.54□□□□□ -1.04
SDF2-207ENST00000588472 CPNE3O75131 537 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms