RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 FAM214AQ32MH5 1076 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 PDCD4Q53EL6 469 aaKnown RBP13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 RRM2BQ7LG56 351 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 RGL4Q8IZJ4 473 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 ZBTB2Q8N680 514 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 BRD9Q9H8M2 597 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 SCML2Q9UQR0 700 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 ATG2BQ96BY7 2078 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 ALPK2Q86TB3 2170 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 ANKDD1BA6NHY2 528 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 BBIP1A8MTZ0 92 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 ZNF487B1APH4 448 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 FPGTO14772 594 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 OR56A5P0C7T3 313 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 KIR3DL1P43629 444 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 DAG1Q14118 895 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 HKDC1Q2TB90 917 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 PTCHD3Q3KNS1 767 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 HMBOX1Q6NT76 420 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 ITIH5Q86UX2 942 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 APCDD1Q8J025 514 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 ZNF614Q8N883 585 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 TMEM102Q8N9M5 508 aaPredicted RBP13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 ARRDC2Q8TBH0 407 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 MAL2Q969L2 176 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 MAGEH1Q9H213 219 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 CCM2LQ9NUG4 571 aaPredicted RBP13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 IKZF3Q9UKT9 509 aa13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 CAB39Q9Y376 341 aaPredicted RBP13.46□□□□□ -0.25
CACNA1A-209ENST00000587525 TCEA1P23193 301 aaKnown RBP13.46□□□□□ -0.26
CACNA1A-209ENST00000587525 GTF2E2P29084 291 aaKnown RBP13.46□□□□□ -0.26
CACNA1A-209ENST00000587525 ST13P50502 369 aaKnown RBP13.46□□□□□ -0.26
CACNA1A-209ENST00000587525 ARSFP54793 590 aa13.46□□□□□ -0.26
CACNA1A-209ENST00000587525 SP3Q02447 781 aa13.46□□□□□ -0.26
CACNA1A-209ENST00000587525 TAF1AQ15573 450 aaPredicted RBP13.46□□□□□ -0.26
CACNA1A-209ENST00000587525 USP41Q3LFD5 358 aa13.46□□□□□ -0.26
CACNA1A-209ENST00000587525 DCDC5Q6ZRR9 648 aa13.46□□□□□ -0.26
CACNA1A-209ENST00000587525 SPATA19Q7Z5L4 167 aa13.46□□□□□ -0.26
CACNA1A-209ENST00000587525 DNAJB7Q7Z6W7 309 aaPredicted RBP13.46□□□□□ -0.26
CACNA1A-209ENST00000587525 UMODL1-AS1Q8N2C9 162 aa13.46□□□□□ -0.26
CACNA1A-209ENST00000587525 TRPV1Q8NER1 839 aa13.46□□□□□ -0.26
CACNA1A-209ENST00000587525 BEX2Q9BXY8 128 aa13.46□□□□□ -0.26
CACNA1A-209ENST00000587525 ATP13A3Q9H7F0 1226 aa13.46□□□□□ -0.26
CACNA1A-209ENST00000587525 MAGEL2Q9UJ55 1249 aa13.46□□□□□ -0.26
CACNA1A-209ENST00000587525 LCHNA4D1U4 455 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 SERPINI2O75830 405 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 CCNKO75909 580 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 APOL3O95236 402 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 TRBC1P01850 177 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 GPIP06744 558 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 BMP1P13497 986 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 VARSP26640 1264 aaKnown RBP13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 RPS3AP61247 264 aaKnown RBP13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 TRAF3Q13114 568 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 NHSL2Q5HYW2 709 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 CCNYL2Q5T2Q4 361 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 BLOC1S3Q6QNY0 202 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 TBPL2Q6SJ96 375 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 ARMC5Q96C12 935 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 DEPDC7Q96QD5 511 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 TMEM248Q9NWD8 314 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 MTRRQ9UBK8 725 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 PCDHB3Q9Y5E6 796 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 TGFB1P01137 390 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 RPS14P62263 151 aaKnown RBP13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 DEPDC1Q5TB30 811 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 FAM91A1Q658Y4 838 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 SULT1C3Q6IMI6 304 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 TYW3Q6IPR3 259 aaKnown RBP13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 IFNL1Q8IU54 200 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 COL26A1Q96A83 441 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 IL4I1Q96RQ9 567 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 SLC22A12Q96S37 553 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 HMX1Q9NP08 348 aaPredicted RBP13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 TOR4AQ9NXH8 423 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 FAM234BA2RU67 622 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 IDH3BO43837 385 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 CDH12P55289 794 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 ST8SIA6P61647 398 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 SPIBQ01892 262 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 NFATC3Q12968 1075 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 ZNF846Q147U1 533 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 ADGRF1Q5T601 910 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 SUSD1Q6UWL2 747 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 ZNF467Q7Z7K2 595 aaPredicted RBP13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 OR2T11Q8NH01 316 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 COQ7Q99807 217 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 EHD1Q9H4M9 534 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 POU2F3Q9UKI9 436 aa13.45□□□□□ -0.26
CACNA1A-209ENST00000587525 PHIPQ8WWQ0 1821 aa13.44□□□□□ -0.26
CACNA1A-209ENST00000587525 HTR3EA5X5Y0 456 aa13.44□□□□□ -0.26
CACNA1A-209ENST00000587525 INMTO95050 263 aa13.44□□□□□ -0.26
CACNA1A-209ENST00000587525 CLDN9O95484 217 aa13.44□□□□□ -0.26
CACNA1A-209ENST00000587525 ZNF12P17014 697 aa13.44□□□□□ -0.26
CACNA1A-209ENST00000587525 DDX5P17844 614 aaKnown RBP13.44□□□□□ -0.26
CACNA1A-209ENST00000587525 DNAJB13P59910 316 aa13.44□□□□□ -0.26
CACNA1A-209ENST00000587525 SREBF2Q12772 1141 aa13.44□□□□□ -0.26
CACNA1A-209ENST00000587525 EPS8Q12929 822 aa13.44□□□□□ -0.26
CACNA1A-209ENST00000587525 GRM2Q14416 872 aa13.44□□□□□ -0.26
CACNA1A-209ENST00000587525 SMN1Q16637 294 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms