RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 ACADLP28330 430 aa19.32■□□□□ 0.68
TRIM47-204ENST00000587339 ABRAXAS2Q15018 415 aa19.32■□□□□ 0.68
TRIM47-204ENST00000587339 ZRSR2Q15696 482 aaKnown RBP19.32■□□□□ 0.68
TRIM47-204ENST00000587339 ATP6AP1LQ52LC2 224 aa19.32■□□□□ 0.68
TRIM47-204ENST00000587339 SPDYE1Q8NFV5 336 aaPredicted RBP19.32■□□□□ 0.68
TRIM47-204ENST00000587339 RASSF4Q9H2L5 321 aa19.32■□□□□ 0.68
TRIM47-204ENST00000587339 KLQ9UEF7 1012 aa19.32■□□□□ 0.68
TRIM47-204ENST00000587339 DUSP12Q9UNI6 340 aa19.32■□□□□ 0.68
TRIM47-204ENST00000587339 NUMA1Q14980 2115 aa19.32■□□□□ 0.68
TRIM47-204ENST00000587339 KLHL33A6NCF5 533 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 MGRN1O60291 552 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 ULK1O75385 1050 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 IDO1P14902 403 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 IL9P15248 144 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 IMPA1P29218 277 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 NAE1Q13564 534 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 PTK2BQ14289 1009 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 MAPRE2Q15555 327 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 AGKQ53H12 422 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 Q6ZSR9 355 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 CHST15Q7LFX5 561 aaPredicted RBP19.31■□□□□ 0.68
TRIM47-204ENST00000587339 SPATA19Q7Z5L4 167 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 FAM13CQ8NE31 585 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 HMGCLL1Q8TB92 370 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 MED8Q96G25 268 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 APOOQ9BUR5 198 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 SLC29A3Q9BZD2 475 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 POLMQ9NP87 494 aaPredicted RBP19.31■□□□□ 0.68
TRIM47-204ENST00000587339 INTS7Q9NVH2 962 aaKnown RBP19.31■□□□□ 0.68
TRIM47-204ENST00000587339 ASF1AQ9Y294 204 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 DOCK9Q9BZ29 2069 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 ZFC3H1O60293 1989 aaKnown RBP19.31■□□□□ 0.68
TRIM47-204ENST00000587339 CACNB4O00305 520 aaPredicted RBP19.31■□□□□ 0.68
TRIM47-204ENST00000587339 AIM2O14862 343 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 ACADVLP49748 655 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 CPSF6Q16630 551 aaKnown RBP eCLIP19.31■□□□□ 0.68
TRIM47-204ENST00000587339 GSTA3Q16772 222 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 METRNLQ641Q3 311 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 UNC5DQ6UXZ4 953 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 PDZD3Q86UT5 571 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 THOC6Q86W42 341 aaKnown RBP19.31■□□□□ 0.68
TRIM47-204ENST00000587339 MAGEC3Q8TD91 643 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 THTPAQ9BU02 230 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 ZDHHC5Q9C0B5 715 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 CA14Q9ULX7 337 aa19.31■□□□□ 0.68
TRIM47-204ENST00000587339 LRRC72A6NJI9 287 aa19.3■□□□□ 0.68
TRIM47-204ENST00000587339 A8MUI8 341 aa19.3■□□□□ 0.68
TRIM47-204ENST00000587339 CHRNB1P11230 501 aa19.3■□□□□ 0.68
TRIM47-204ENST00000587339 NUDT2P50583 147 aa19.3■□□□□ 0.68
TRIM47-204ENST00000587339 ERVK-8P63133 956 aa19.3■□□□□ 0.68
TRIM47-204ENST00000587339 IRX1P78414 480 aaPredicted RBP19.3■□□□□ 0.68
TRIM47-204ENST00000587339 RPS6KA2Q15349 733 aa19.3■□□□□ 0.68
TRIM47-204ENST00000587339 GGTA1PQ4G0N0 100 aa19.3■□□□□ 0.68
TRIM47-204ENST00000587339 C6orf136Q5SQH8 315 aa19.3■□□□□ 0.68
TRIM47-204ENST00000587339 GK5Q6ZS86 529 aa19.3■□□□□ 0.68
TRIM47-204ENST00000587339 RNF165Q6ZSG1 346 aa19.3■□□□□ 0.68
TRIM47-204ENST00000587339 TRIM69Q86WT6 500 aa19.3■□□□□ 0.68
TRIM47-204ENST00000587339 PGBD3Q8N328 593 aa19.3■□□□□ 0.68
TRIM47-204ENST00000587339 MIER2Q8N344 545 aa19.3■□□□□ 0.68
TRIM47-204ENST00000587339 FNDC5Q8NAU1 212 aa19.3■□□□□ 0.68
TRIM47-204ENST00000587339 OR2T34Q8NGX1 318 aa19.3■□□□□ 0.68
TRIM47-204ENST00000587339 RMI1Q9H9A7 625 aa19.3■□□□□ 0.68
TRIM47-204ENST00000587339 ITM2CQ9NQX7 267 aa19.3■□□□□ 0.68
TRIM47-204ENST00000587339 ZNF490Q9ULM2 529 aaPredicted RBP19.3■□□□□ 0.68
TRIM47-204ENST00000587339 PSMD13Q9UNM6 376 aa19.3■□□□□ 0.68
TRIM47-204ENST00000587339 SLC17A4Q9Y2C5 497 aa19.3■□□□□ 0.68
TRIM47-204ENST00000587339 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.3■□□□□ 0.68
TRIM47-204ENST00000587339 KRT6AP02538 564 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 FUCA1P04066 466 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 KRT6BP04259 564 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 CEACAM5P06731 702 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 ITGAXP20702 1163 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 GPX3P22352 226 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 KRT6CP48668 564 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 DGKEP52429 567 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 DIO3P55073 304 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 NR6A1Q15406 480 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 TMEM31Q5JXX7 168 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 PAOXQ6QHF9 649 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 SFRP1Q8N474 314 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 PPFIBP2Q8ND30 876 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 OR9I1Q8NGQ6 314 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 OR9A1PQ8NGU1 263 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 OR56A3Q8NH54 315 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 ZNF480Q8WV37 535 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 RCN3Q96D15 328 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 EFCAB1Q9HAE3 211 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 SDR39U1Q9NRG7 319 aaPredicted RBP19.29■□□□□ 0.68
TRIM47-204ENST00000587339 FARSBQ9NSD9 589 aaKnown RBP19.29■□□□□ 0.68
TRIM47-204ENST00000587339 IFRD1O00458 451 aaPredicted RBP19.29■□□□□ 0.68
TRIM47-204ENST00000587339 MANBAO00462 879 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 LSM1O15116 133 aaKnown RBP19.29■□□□□ 0.68
TRIM47-204ENST00000587339 ACP5P13686 325 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 HALP42357 657 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 STX5Q13190 355 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 PARP9Q8IXQ6 854 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 KLHDC8AQ8IYD2 350 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 SYTL1Q8IYJ3 562 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 L3MBTL4Q8NA19 623 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 KYQ8NBH2 561 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms