RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 PIWIL2Q8TC59 973 aaKnown RBP12.34□□□□□ -0.43
VMP1-202ENST00000585847 UBTD2Q8WUN7 234 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 ELMO1Q92556 727 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 HIST1H2AHQ96KK5 128 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 CCT7Q99832 543 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 HIST1H2AJQ99878 128 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 TIMM29Q9BSF4 260 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 H2AFJQ9BTM1 129 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 TRNAU1APQ9NX07 287 aaKnown RBP12.34□□□□□ -0.43
VMP1-202ENST00000585847 KCNK4Q9NYG8 393 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 CPSF2Q9P2I0 782 aaKnown RBP12.34□□□□□ -0.43
VMP1-202ENST00000585847 ARL2BPQ9Y2Y0 163 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 RAP2CQ9Y3L5 183 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 GPSM3Q9Y4H4 160 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 MGAT4DA6NG13 374 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 IQCF5A8MTL0 148 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 TM4SF5O14894 197 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 KMOO15229 486 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 PCDHGA12O60330 932 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 DFNA5O60443 496 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 DLX3O60479 287 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 POP7O75817 140 aaKnown RBP12.33□□□□□ -0.44
VMP1-202ENST00000585847 DCTN3O75935 186 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 HSPA4LO95757 839 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 EML2O95834 649 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 CATP04040 527 aaKnown RBP12.33□□□□□ -0.44
VMP1-202ENST00000585847 CD59P13987 128 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 GFAPP14136 432 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 PCSK2P16519 638 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 SLC1A6P48664 564 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 CCT8P50990 548 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 NOVA1P51513 510 aaKnown RBP12.33□□□□□ -0.44
VMP1-202ENST00000585847 SEC24CP53992 1094 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 CTBSQ01459 385 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 DMPKQ09013 629 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 LRP8Q14114 963 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 PRRT3Q5FWE3 981 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 SULT1C3Q6IMI6 304 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 UNC5DQ6UXZ4 953 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 GALNT13Q8IUC8 556 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 SLC22A15Q8IZD6 547 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 LILRA3Q8N6C8 439 aaPredicted RBP12.33□□□□□ -0.44
VMP1-202ENST00000585847 OR2L2Q8NH16 312 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 LMX1AQ8TE12 382 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 SLC12A9Q9BXP2 914 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 FAM107BQ9H098 131 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 ILKAPQ9H0C8 392 aaPredicted RBP12.33□□□□□ -0.44
VMP1-202ENST00000585847 WWP1Q9H0M0 922 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 SARS2Q9NP81 518 aaKnown RBP12.33□□□□□ -0.44
VMP1-202ENST00000585847 GALPQ9UBC7 116 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 ZNHIT2Q9UHR6 403 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 ACSL5Q9ULC5 683 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 BTBD3Q9Y2F9 522 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 USH1CQ9Y6N9 552 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 LAMA1P25391 3075 aa12.33□□□□□ -0.44
VMP1-202ENST00000585847 WDR91A4D1P6 747 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 A6NCN8 305 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 C4orf47A7E2U8 309 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 SUPT3HB4E1H0 165 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 GIPC1O14908 333 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 YY2O15391 372 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 AQP9O43315 295 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 KDM1AO60341 852 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 SUPT3HO75486 399 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 TOP3BO95985 862 aaKnown RBP12.32□□□□□ -0.44
VMP1-202ENST00000585847 ANXA5P08758 320 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 SBK3P0C264 359 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 ATXN8OSP0DMR3 200 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 ACP5P13686 325 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 ALOX15P16050 662 aaPredicted RBP12.32□□□□□ -0.44
VMP1-202ENST00000585847 CCR7P32248 378 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 HSD17B2P37059 387 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 BLKP51451 505 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 CLCNKAP51800 687 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 LCP2Q13094 533 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 SETDB1Q15047 1291 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 PCBP2Q15366 365 aaKnown RBP eCLIP12.32□□□□□ -0.44
VMP1-202ENST00000585847 TGFBIQ15582 683 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 TSNQ15631 228 aaKnown RBP12.32□□□□□ -0.44
VMP1-202ENST00000585847 PPP1R3AQ16821 1122 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 ANKS6Q68DC2 871 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 FRMD7Q6ZUT3 714 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 CHST15Q7LFX5 561 aaPredicted RBP12.32□□□□□ -0.44
VMP1-202ENST00000585847 AMZ2Q86W34 360 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 TRAPPC5Q8IUR0 188 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 RASGRP3Q8IV61 690 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 MCOLN3Q8TDD5 553 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 EEF1AKMT1Q8WVE0 214 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 ASB11Q8WXH4 323 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 PTERQ96BW5 349 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 PARVBQ9HBI1 364 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 TMEM9BQ9NQ34 198 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 ZNF358Q9NW07 568 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 SPASTQ9UBP0 616 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 APOBEC2Q9Y235 224 aaKnown RBP12.32□□□□□ -0.44
VMP1-202ENST00000585847 KCNK6Q9Y257 313 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 PCDHGB2Q9Y5G2 931 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 CSNK1G3Q9Y6M4 447 aa12.32□□□□□ -0.44
VMP1-202ENST00000585847 LY6G6EA0A0G2JKS1 128 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 GOLGA8QA0A0J9YX86 632 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms