RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 EIF3BP55884 814 aaKnown RBP12.71□□□□□ -0.37
ERBB2-220ENST00000584684 POLE2P56282 527 aa12.71□□□□□ -0.37
ERBB2-220ENST00000584684 GPS2Q13227 327 aa12.71□□□□□ -0.37
ERBB2-220ENST00000584684 GRB7Q14451 532 aa12.71□□□□□ -0.37
ERBB2-220ENST00000584684 ANKRD20A4Q4UJ75 823 aa12.71□□□□□ -0.37
ERBB2-220ENST00000584684 RNASEH2BQ5TBB1 312 aaKnown RBP12.71□□□□□ -0.37
ERBB2-220ENST00000584684 IZUMO3Q5VZ72 239 aa12.71□□□□□ -0.37
ERBB2-220ENST00000584684 NEPROQ6NW34 567 aa12.71□□□□□ -0.37
ERBB2-220ENST00000584684 CASC4Q6P4E1 433 aa12.71□□□□□ -0.37
ERBB2-220ENST00000584684 CES3Q6UWW8 571 aa12.71□□□□□ -0.37
ERBB2-220ENST00000584684 CDHR3Q6ZTQ4 885 aa12.71□□□□□ -0.37
ERBB2-220ENST00000584684 OTOAQ7RTW8 1153 aa12.71□□□□□ -0.37
ERBB2-220ENST00000584684 LMNTD2Q8IXW0 634 aa12.71□□□□□ -0.37
ERBB2-220ENST00000584684 OTUD6BQ8N6M0 293 aa12.71□□□□□ -0.37
ERBB2-220ENST00000584684 LINC01555Q8NAE3 123 aa12.71□□□□□ -0.37
ERBB2-220ENST00000584684 OR2L8Q8NGY9 312 aa12.71□□□□□ -0.37
ERBB2-220ENST00000584684 OR1L3Q8NH93 324 aa12.71□□□□□ -0.37
ERBB2-220ENST00000584684 GSDMBQ8TAX9 411 aa12.71□□□□□ -0.37
ERBB2-220ENST00000584684 APOBEC4Q8WW27 367 aaKnown RBP12.71□□□□□ -0.37
ERBB2-220ENST00000584684 SLC22A18Q96BI1 424 aa12.71□□□□□ -0.37
ERBB2-220ENST00000584684 DPH2Q9BQC3 489 aaPredicted RBP12.71□□□□□ -0.37
ERBB2-220ENST00000584684 TRMT1Q9NXH9 659 aaKnown RBP12.71□□□□□ -0.37
ERBB2-220ENST00000584684 SPHK1Q9NYA1 384 aa12.71□□□□□ -0.37
ERBB2-220ENST00000584684 PCYOX1Q9UHG3 505 aa12.71□□□□□ -0.37
ERBB2-220ENST00000584684 MRPS18BQ9Y676 258 aaKnown RBP12.71□□□□□ -0.37
ERBB2-220ENST00000584684 UBR5O95071 2799 aaPredicted RBP12.7□□□□□ -0.38
ERBB2-220ENST00000584684 SEC16AO15027 2179 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 USP27XA6NNY8 438 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 TMEM150CB9EJG8 249 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 RASGRF2O14827 1237 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 ZNF185O15231 689 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 CREG1O75629 220 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 USP1O94782 785 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 S1PR4O95977 384 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 NTRK1P04629 796 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 PLA2G2AP14555 144 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 CYP2A7P20853 494 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 CD9P21926 228 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 CCNFP41002 786 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 ITGA1P56199 1179 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 KCNAB2Q13303 367 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 PTK6Q13882 451 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 DHX34Q14147 1143 aaKnown RBP12.7□□□□□ -0.38
ERBB2-220ENST00000584684 ZIC1Q15915 447 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 KCTD19Q17RG1 926 aaPredicted RBP12.7□□□□□ -0.38
ERBB2-220ENST00000584684 PAPD7Q5XG87 772 aaKnown RBP12.7□□□□□ -0.38
ERBB2-220ENST00000584684 ZNF470Q6ECI4 717 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 CENPUQ71F23 418 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 ZNF605Q86T29 641 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 TRIM73Q86UV7 250 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 HOOK3Q86VS8 718 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 DSELQ8IZU8 1212 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 AGGF1Q8N302 714 aaeCLIP12.7□□□□□ -0.38
ERBB2-220ENST00000584684 SLC38A9Q8NBW4 561 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 HMGCLL1Q8TB92 370 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 ZNF669Q96BR6 464 aaPredicted RBP12.7□□□□□ -0.38
ERBB2-220ENST00000584684 ACTL8Q9H568 366 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 ENAMQ9NRM1 1142 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 KLHL42Q9P2K6 505 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 SERTAD3Q9UJW9 196 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 PLAGL1Q9UM63 463 aa12.7□□□□□ -0.38
ERBB2-220ENST00000584684 FER1L5A0AVI2 2057 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 GOLGA8KD6RF30 607 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 GOLGA8TH3BQL2 631 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 GOLGA8MH3BSY2 632 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 MEN1O00255 615 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 NIPSNAP2O75323 286 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 MATN4O95460 622 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 C1orf105O95561 183 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 KLK3P07288 261 aaPredicted RBP12.69□□□□□ -0.38
ERBB2-220ENST00000584684 HBQ1P09105 142 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 RAB40ALP0C0E4 278 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 PTPN4P29074 926 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 PPP1R7Q15435 360 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 UGT8Q16880 541 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 LONRF1Q17RB8 773 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 SYDE1Q6ZW31 735 aaPredicted RBP12.69□□□□□ -0.38
ERBB2-220ENST00000584684 SYVN1Q86TM6 617 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 CALML6Q8TD86 181 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 KCNJ9Q92806 393 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 RAD51AP1Q96B01 352 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 RNF31Q96EP0 1072 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 SIGLEC10Q96LC7 697 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 RUNDC3BQ96NL0 473 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 TRIM56Q9BRZ2 755 aaKnown RBP12.69□□□□□ -0.38
ERBB2-220ENST00000584684 DDX47Q9H0S4 455 aaKnown RBP12.69□□□□□ -0.38
ERBB2-220ENST00000584684 SLC25A18Q9H1K4 315 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 ACTR5Q9H9F9 607 aaPredicted RBP12.69□□□□□ -0.38
ERBB2-220ENST00000584684 FAM60AQ9NP50 221 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 PCMTD2Q9NV79 361 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 POLHQ9Y253 713 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 KLK4Q9Y5K2 254 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 KCNMB2Q9Y691 235 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 AP1M2Q9Y6Q5 423 aa12.69□□□□□ -0.38
ERBB2-220ENST00000584684 E7EQ34 232 aa12.68□□□□□ -0.38
ERBB2-220ENST00000584684 DNALI1O14645 258 aaPredicted RBP12.68□□□□□ -0.38
ERBB2-220ENST00000584684 PRICKLE3O43900 615 aaPredicted RBP12.68□□□□□ -0.38
ERBB2-220ENST00000584684 ERGP11308 486 aa12.68□□□□□ -0.38
ERBB2-220ENST00000584684 PKMP14618 531 aaKnown RBP12.68□□□□□ -0.38
ERBB2-220ENST00000584684 PGAM1P18669 254 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms