RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 INTS10Q9NVR2 710 aaKnown RBP18.85■□□□□ 0.61
SREBF1-220ENST00000581707 SERTAD3Q9UJW9 196 aa18.85■□□□□ 0.61
SREBF1-220ENST00000581707 PCDHB3Q9Y5E6 796 aa18.85■□□□□ 0.61
SREBF1-220ENST00000581707 SNRNP200O75643 2136 aaKnown RBP18.85■□□□□ 0.61
SREBF1-220ENST00000581707 ZCWPW2A0A1B0GU75 182 aa18.84■□□□□ 0.61
SREBF1-220ENST00000581707 NIPSNAP2O75323 286 aa18.84■□□□□ 0.61
SREBF1-220ENST00000581707 USP1O94782 785 aa18.84■□□□□ 0.61
SREBF1-220ENST00000581707 S1PR4O95977 384 aa18.84■□□□□ 0.61
SREBF1-220ENST00000581707 CHRM3P20309 590 aa18.84■□□□□ 0.61
SREBF1-220ENST00000581707 PKLRP30613 574 aa18.84■□□□□ 0.61
SREBF1-220ENST00000581707 DNASE1L3Q13609 305 aa18.84■□□□□ 0.61
SREBF1-220ENST00000581707 PTK6Q13882 451 aa18.84■□□□□ 0.61
SREBF1-220ENST00000581707 KIR2DS3Q14952 304 aa18.84■□□□□ 0.61
SREBF1-220ENST00000581707 ZNF470Q6ECI4 717 aa18.84■□□□□ 0.61
SREBF1-220ENST00000581707 C16orf46Q6P387 395 aa18.84■□□□□ 0.61
SREBF1-220ENST00000581707 TTC23LQ6PF05 361 aa18.84■□□□□ 0.61
SREBF1-220ENST00000581707 CDHR3Q6ZTQ4 885 aa18.84■□□□□ 0.61
SREBF1-220ENST00000581707 CREG2Q8IUH2 290 aa18.84■□□□□ 0.61
SREBF1-220ENST00000581707 OR1L3Q8NH93 324 aa18.84■□□□□ 0.61
SREBF1-220ENST00000581707 CT55Q8WUE5 264 aa18.84■□□□□ 0.61
SREBF1-220ENST00000581707 TCTN2Q96GX1 697 aa18.84■□□□□ 0.61
SREBF1-220ENST00000581707 AKIRIN1Q9H9L7 192 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-220ENST00000581707 CIDEBQ9UHD4 219 aa18.84■□□□□ 0.61
SREBF1-220ENST00000581707 PCDHGA6Q9Y5G7 932 aa18.84■□□□□ 0.61
SREBF1-220ENST00000581707 SAR1BQ9Y6B6 198 aa18.84■□□□□ 0.61
SREBF1-220ENST00000581707 ZNF462Q96JM2 2506 aa18.83■□□□□ 0.61
SREBF1-220ENST00000581707 TLN1Q9Y490 2541 aaKnown RBP18.83■□□□□ 0.61
SREBF1-220ENST00000581707 BOD1L1Q8NFC6 3051 aa18.83■□□□□ 0.61
SREBF1-220ENST00000581707 A0A0J9YY10 115 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 CTAGE9A4FU28 777 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 C21orf140B9A014 251 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 DNALI1O14645 258 aaPredicted RBP18.83■□□□□ 0.6
SREBF1-220ENST00000581707 SFTPCP11686 197 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 PKMP14618 531 aaKnown RBP18.83■□□□□ 0.6
SREBF1-220ENST00000581707 CYP2A7P20853 494 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 CD9P21926 228 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 OAS2P29728 719 aaKnown RBP18.83■□□□□ 0.6
SREBF1-220ENST00000581707 PEBP1P30086 187 aaKnown RBP18.83■□□□□ 0.6
SREBF1-220ENST00000581707 PTGIRP43119 386 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 GRB7Q14451 532 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 LONRF1Q17RB8 773 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 SLC5A12Q1EHB4 618 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 ZNF789Q5FWF6 425 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 PRAMEF17Q5VTA0 474 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 FAM199XQ6PEV8 388 aaPredicted RBP18.83■□□□□ 0.6
SREBF1-220ENST00000581707 PCGF5Q86SE9 256 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 C19orf47Q8N9M1 422 aaKnown RBP18.83■□□□□ 0.6
SREBF1-220ENST00000581707 LINC01555Q8NAE3 123 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 SLC38A9Q8NBW4 561 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 FAM136AQ96C01 138 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 FOPNLQ96NB1 174 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 MENTQ9BUN1 341 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 FAM60AQ9NP50 221 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 C20orf96Q9NUD7 363 aaPredicted RBP18.83■□□□□ 0.6
SREBF1-220ENST00000581707 SLC39A10Q9ULF5 831 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 MRFAP1Q9Y605 127 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 NFS1Q9Y697 457 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 SEC16AO15027 2179 aa18.83■□□□□ 0.6
SREBF1-220ENST00000581707 E5RI56 91 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 C1orf105O95561 183 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 KLK3P07288 261 aaPredicted RBP18.82■□□□□ 0.6
SREBF1-220ENST00000581707 CCR10P46092 362 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 ITGA1P56199 1179 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 GPS2Q13227 327 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 CTBP1Q13363 440 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 ZIC1Q15915 447 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 ATP1A1-AS1Q5TC04 95 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 SYDE1Q6ZW31 735 aaPredicted RBP18.82■□□□□ 0.6
SREBF1-220ENST00000581707 DENND6AQ8IWF6 608 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 KLHL7Q8IXQ5 586 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 C2orf73Q8N5S3 287 aaPredicted RBP18.82■□□□□ 0.6
SREBF1-220ENST00000581707 OR2L8Q8NGY9 312 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 CALML6Q8TD86 181 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 N4BP2L2Q92802 583 aaPredicted RBP18.82■□□□□ 0.6
SREBF1-220ENST00000581707 MR1Q95460 341 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 RAD51AP1Q96B01 352 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 SLC22A18Q96BI1 424 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 CLIP3Q96DZ5 547 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 LRFN5Q96NI6 719 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 RUNDC3BQ96NL0 473 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 IL17FQ96PD4 163 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 GPR87Q9BY21 358 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 CHRNA10Q9GZZ6 450 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 GALPQ9UBC7 116 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 RUVBL2Q9Y230 463 aaKnown RBP18.82■□□□□ 0.6
SREBF1-220ENST00000581707 FAM169AQ9Y6X4 670 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 BAHCC1Q9P281 2608 aa18.82■□□□□ 0.6
SREBF1-220ENST00000581707 GCN1Q92616 2671 aaKnown RBP18.81■□□□□ 0.6
SREBF1-220ENST00000581707 SPTA1P02549 2419 aa18.81■□□□□ 0.6
SREBF1-220ENST00000581707 RASGRF2O14827 1237 aa18.81■□□□□ 0.6
SREBF1-220ENST00000581707 CREG1O75629 220 aa18.81■□□□□ 0.6
SREBF1-220ENST00000581707 IVDP26440 423 aa18.81■□□□□ 0.6
SREBF1-220ENST00000581707 ATP5DP30049 168 aa18.81■□□□□ 0.6
SREBF1-220ENST00000581707 CCNFP41002 786 aa18.81■□□□□ 0.6
SREBF1-220ENST00000581707 ERV3-1Q14264 604 aa18.81■□□□□ 0.6
SREBF1-220ENST00000581707 GBX1Q14549 363 aa18.81■□□□□ 0.6
SREBF1-220ENST00000581707 DEFB109BQ30KR1 87 aa18.81■□□□□ 0.6
SREBF1-220ENST00000581707 IZUMO3Q5VZ72 239 aa18.81■□□□□ 0.6
SREBF1-220ENST00000581707 CNSTQ6PJW8 725 aa18.81■□□□□ 0.6
SREBF1-220ENST00000581707 LMNTD2Q8IXW0 634 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms