RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 FMO4P31512 558 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 HSD11B2P80365 405 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 ABHD18Q0P651 414 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 TUBB3Q13509 450 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 CTSL3PQ5NE16 218 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 LCN10Q6JVE6 187 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 ZNF449Q6P9G9 518 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 C6orf15Q6UXA7 325 aaPredicted RBP9.4□□□□□ -0.9
TOP3A-211ENST00000581536 RIPOR1Q6ZS17 1223 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 TRIM73Q86UV7 250 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 PPP1R3BQ86XI6 285 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 ZSCAN1Q8NBB4 408 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.4□□□□□ -0.91e-6■■■■■ 31.4
TOP3A-211ENST00000581536 FAM136AQ96C01 138 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 ZNF501Q96CX3 271 aaPredicted RBP9.4□□□□□ -0.9
TOP3A-211ENST00000581536 PDLIM2Q96JY6 352 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 TRAPPC9Q96Q05 1148 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 TTC1Q99614 292 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 MVB12BQ9H7P6 319 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 VPS37BQ9H9H4 285 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 FGF21Q9NSA1 209 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 ACTR10Q9NZ32 417 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 RARRES3Q9UL19 164 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 NOVA2Q9UNW9 492 aaKnown RBP9.4□□□□□ -0.9
TOP3A-211ENST00000581536 ASF1AQ9Y294 204 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 CRYL1Q9Y2S2 319 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 RPS6KL1Q9Y6S9 549 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 CFAP46Q8IYW2 2715 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 MDC1Q14676 2089 aaKnown RBP9.4□□□□□ -0.91
TOP3A-211ENST00000581536 SDR42E2A6NKP2 422 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 PGRMC1O00264 195 aaKnown RBP9.39□□□□□ -0.91
TOP3A-211ENST00000581536 KIF5CO60282 957 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 PHF2O75151 1096 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 KATNA1O75449 491 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 NDUFS3O75489 264 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 BANF1O75531 89 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 ZBTB11O95625 1053 aaPredicted RBP9.39□□□□□ -0.91
TOP3A-211ENST00000581536 GSTM1P09488 218 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 FAM87AP0C7U9 286 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 PRKAR1AP10644 381 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 PEBP1P30086 187 aaKnown RBP9.39□□□□□ -0.91
TOP3A-211ENST00000581536 DLSTP36957 453 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 STAT5AP42229 794 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 MAGEA6P43360 314 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 ARL4DP49703 201 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 CDK16Q00536 496 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 GSTM4Q03013 218 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 PRKAA1Q13131 559 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 GRB7Q14451 532 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 ZIC1Q15915 447 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 CCSMST1Q4G0I0 132 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 SYTL3Q4VX76 610 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 PTRHD1Q6GMV3 140 aaKnown RBP9.39□□□□□ -0.91
TOP3A-211ENST00000581536 C16orf46Q6P387 395 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 CASC4Q6P4E1 433 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 CENPUQ71F23 418 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 TBC1D21Q8IYX1 336 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 SLC22A15Q8IZD6 547 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 VWA5B2Q8N398 1253 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 NAT8LQ8N9F0 302 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 LSM14AQ8ND56 463 aaKnown RBP9.39□□□□□ -0.91
TOP3A-211ENST00000581536 FLVCR1-AS1Q8TAF5 88 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 PEX13Q92968 403 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 WBP1Q96G27 269 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 CAPZA3Q96KX2 299 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 SIGLEC10Q96LC7 697 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 PWWP2AQ96N64 755 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 BIRC8Q96P09 236 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 OR2A14Q96R47 310 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 CD180Q99467 661 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 DDX47Q9H0S4 455 aaKnown RBP9.39□□□□□ -0.91
TOP3A-211ENST00000581536 TSPAN10Q9H1Z9 355 aaPredicted RBP9.39□□□□□ -0.91
TOP3A-211ENST00000581536 TRIT1Q9H3H1 467 aaKnown RBP9.39□□□□□ -0.91
TOP3A-211ENST00000581536 GPN2Q9H9Y4 310 aaPredicted RBP9.39□□□□□ -0.91
TOP3A-211ENST00000581536 MRM3Q9HC36 420 aaKnown RBP9.39□□□□□ -0.91
TOP3A-211ENST00000581536 FAM60AQ9NP50 221 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 PDE7BQ9NP56 450 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 C1GALT1Q9NS00 363 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 KCND1Q9NSA2 647 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 LNPEPQ9UIQ6 1025 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 CROTQ9UKG9 612 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 POMT2Q9UKY4 750 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 PADI1Q9ULC6 663 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 RUVBL2Q9Y230 463 aaKnown RBP9.39□□□□□ -0.91
TOP3A-211ENST00000581536 KLHL20Q9Y2M5 609 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 NFS1Q9Y697 457 aa9.39□□□□□ -0.91
TOP3A-211ENST00000581536 PIPSLA2A3N6 862 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 QSOX1O00391 747 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 PRMT5O14744 637 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-211ENST00000581536 FANCGO15287 622 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 NIPSNAP2O75323 286 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 SLCO2B1O94956 709 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 CHRM5P08912 532 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-211ENST00000581536 UGT2B7P16662 529 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 TCN2P20062 427 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 MSX1P28360 303 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 OAS2P29728 719 aaKnown RBP9.38□□□□□ -0.91
TOP3A-211ENST00000581536 PPARGP37231 505 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-211ENST00000581536 TTPAP49638 278 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 EIF3BP55884 814 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms