RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 SYTL3Q4VX76 610 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 FASTKD1Q53R41 847 aaKnown RBP14□□□□□ -0.17
SMARCE1-216ENST00000580419 TRIM58Q8NG06 486 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 OR5AR1Q8NGP9 310 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 HMGCLL1Q8TB92 370 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 NAT14Q8WUY8 206 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 PANX3Q96QZ0 392 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 TCF12Q99081 682 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 HGH1Q9BTY7 390 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 MENTQ9BUN1 341 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 TRIM4Q9C037 500 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 C5AR2Q9P296 337 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 ANAPC5Q9UJX4 755 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 ZNF451Q9Y4E5 1061 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 SHANK1Q9Y566 2161 aa14□□□□□ -0.17
SMARCE1-216ENST00000580419 POLEQ07864 2286 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 HEATR5BQ9P2D3 2071 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 A0A0U1RQJ8 604 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 ZNF749O43361 778 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 KLF7O75840 302 aaPredicted RBP13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 IFNB1P01574 187 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 TPBGLP0DKB5 382 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 AOAHP28039 575 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 ATP5DP30049 168 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 PKLRP30613 574 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 MAGEA6P43360 314 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 GCGRP47871 477 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 ARCN1P48444 511 aaKnown RBP13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 LMAN1P49257 510 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 PRKG2Q13237 762 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 SSPNQ14714 243 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 CCDC38Q502W7 563 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 TMEM135Q86UB9 458 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 RAB43Q86YS6 212 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 DCUN1D3Q8IWE4 304 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 DNAJC22Q8N4W6 341 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 ENDOVQ8N8Q3 282 aaKnown RBP13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 PPHLN1Q8NEY8 458 aaKnown RBP13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 OR6P1Q8NGX9 317 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 SLC25A23Q9BV35 468 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 KIFC1Q9BW19 673 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 ACSS2Q9NR19 701 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 GUCA1BQ9UMX6 200 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 PLCL2Q9UPR0 1127 aa13.99□□□□□ -0.17
SMARCE1-216ENST00000580419 NUP210LQ5VU65 1888 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 OR51F1A6NGY5 319 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 TARM1B6A8C7 271 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 H3BMM5 538 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 ZSCAN9O15535 394 aaPredicted RBP13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 OR1I1O60431 355 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 OR2B3O76000 313 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 TMEM63AO94886 807 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 TPSB2P20231 275 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 CD9P21926 228 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 CCR7P32248 378 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 RPL22P35268 128 aaKnown RBP13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 GRIA1P42261 906 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 ARSFP54793 590 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 NAA25Q14CX7 972 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 TMED2Q15363 201 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 TPSAB1Q15661 275 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 RNF187Q5TA31 235 aaPredicted RBP13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 FBXO38Q6PIJ6 1188 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 ATCAYQ86WG3 371 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 OR2L8Q8NGY9 312 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 C1orf54Q8WWF1 131 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 DLG3Q92796 817 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 N4BP2L2Q92802 583 aaPredicted RBP13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 ZUFSPQ96AP4 578 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 ZNF778Q96MU6 729 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 ZNF285Q96NJ3 590 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 GBP5Q96PP8 586 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 RUFY1Q96T51 708 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 SMAD5Q99717 465 aaKnown RBP13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 TRIM55Q9BYV6 548 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 P2RY12Q9H244 342 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 FAM60AQ9NP50 221 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 CATSPERZQ9NTU4 200 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 INTS7Q9NVH2 962 aaKnown RBP13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 IL1RAPL1Q9NZN1 696 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 BFARQ9NZS9 450 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 SLC2A6Q9UGQ3 507 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 TNRC6AQ8NDV7 1962 aaKnown RBP13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 DOCK10Q96BY6 2186 aa13.98□□□□□ -0.17
SMARCE1-216ENST00000580419 PFDN6O15212 129 aa13.97□□□□□ -0.17
SMARCE1-216ENST00000580419 CD3EAPO15446 510 aaKnown RBP13.97□□□□□ -0.17
SMARCE1-216ENST00000580419 ALBP02768 609 aa13.97□□□□□ -0.17
SMARCE1-216ENST00000580419 CCDC175P0C221 793 aa13.97□□□□□ -0.17
SMARCE1-216ENST00000580419 CCNFP41002 786 aa13.97□□□□□ -0.17
SMARCE1-216ENST00000580419 RPS18P62269 152 aaKnown RBP13.97□□□□□ -0.17
SMARCE1-216ENST00000580419 DCDP81605 110 aaKnown RBP13.97□□□□□ -0.17
SMARCE1-216ENST00000580419 UBAP2LQ14157 1087 aaKnown RBP13.97□□□□□ -0.17
SMARCE1-216ENST00000580419 ZIC1Q15915 447 aa13.97□□□□□ -0.17
SMARCE1-216ENST00000580419 ZC3H12BQ5HYM0 836 aaKnown RBP13.97□□□□□ -0.17
SMARCE1-216ENST00000580419 MRPL14Q6P1L8 145 aaKnown RBP13.97□□□□□ -0.17
SMARCE1-216ENST00000580419 GALNT11Q8NCW6 608 aa13.97□□□□□ -0.17
SMARCE1-216ENST00000580419 OR2Y1Q8NGV0 311 aa13.97□□□□□ -0.17
SMARCE1-216ENST00000580419 MAGEC3Q8TD91 643 aa13.97□□□□□ -0.17
SMARCE1-216ENST00000580419 FKBP10Q96AY3 582 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms