RNA–Protein interactions for RNA: ENST00000578593.1

DDX42-207, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 2,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-207ENST00000578593 QKIQ96PU8 341 aaKnown RBP eCLIP7.36□□□□□ -1.23
DDX42-207ENST00000578593 NPAS2Q99743 824 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 EBNA1BP2Q99848 306 aaKnown RBP7.36□□□□□ -1.23
DDX42-207ENST00000578593 SSX3Q99909 188 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 SLC22A4Q9H015 551 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 C11orf49Q9H6J7 331 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 BIN3Q9NQY0 253 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 EXD2Q9NVH0 621 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 PAK5Q9P286 719 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 POLLQ9UGP5 575 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 DCDC2Q9UHG0 476 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 PCDHB10Q9UN67 800 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 KLHL20Q9Y2M5 609 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 PCDHB9Q9Y5E1 797 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 PCDHB5Q9Y5E4 795 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 LRRC37AA6NMS7 1700 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 BTAF1O14981 1849 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 ZNF646O15015 1829 aaPredicted RBP7.36□□□□□ -1.23
DDX42-207ENST00000578593 PTPRFP10586 1907 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 NCF1BA6NI72 391 aaPredicted RBP7.36□□□□□ -1.23
DDX42-207ENST00000578593 NCF1CA8MVU1 366 aaPredicted RBP7.36□□□□□ -1.23
DDX42-207ENST00000578593 ANGPT2O15123 496 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 CABYRO75952 493 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 OR2B3O76000 313 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 CLIC3O95833 236 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 IFNA4P05014 189 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 JUNP05412 331 aaKnown RBP7.36□□□□□ -1.23
DDX42-207ENST00000578593 CD46P15529 392 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 MAGP20916 626 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 EEF1B2P24534 225 aaKnown RBP7.36□□□□□ -1.23
DDX42-207ENST00000578593 GATMP50440 423 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 CCR9P51686 369 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 CDH4P55283 916 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 DEFA6Q01524 100 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 KRR1Q13601 381 aaKnown RBP7.36□□□□□ -1.23
DDX42-207ENST00000578593 PUM1Q14671 1186 aaKnown RBP eCLIP7.36□□□□□ -1.23
DDX42-207ENST00000578593 GPR33Q49SQ1 333 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 CATSPEREQ5SY80 951 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 MSANTD1Q6ZTZ1 278 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 NECAB2Q7Z6G3 386 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 RABEPKQ7Z6M1 372 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 DNAJB7Q7Z6W7 309 aaPredicted RBP7.36□□□□□ -1.23
DDX42-207ENST00000578593 PLEKHH3Q7Z736 793 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 CDKL3Q8IVW4 592 aaPredicted RBP7.36□□□□□ -1.23
DDX42-207ENST00000578593 PRSS58Q8IYP2 241 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 TTC29Q8NA56 475 aaPredicted RBP7.36□□□□□ -1.23
DDX42-207ENST00000578593 FBXO15Q8NCQ5 510 aaPredicted RBP7.36□□□□□ -1.23
DDX42-207ENST00000578593 ASB9Q96DX5 294 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 OR5M11Q96RB7 305 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 SOX7Q9BT81 388 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 DUSP26Q9BV47 211 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 SDCBP2Q9H190 292 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 SPNS1Q9H2V7 528 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 CCDC86Q9H6F5 360 aaKnown RBP7.36□□□□□ -1.23
DDX42-207ENST00000578593 XPNPEP3Q9NQH7 507 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 IMPAD1Q9NX62 359 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 ADA2Q9NZK5 511 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 ARHGAP28Q9P2N2 729 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 CNTN6Q9UQ52 1028 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 NAALAD2Q9Y3Q0 740 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 COPG1Q9Y678 874 aaKnown RBP7.36□□□□□ -1.23
DDX42-207ENST00000578593 NRXN2Q9P2S2 1712 aa7.36□□□□□ -1.23
DDX42-207ENST00000578593 ANKRD12Q6UB98 2062 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 TEX13CA0A0J9YWL9 993 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 DHX15O43143 795 aaKnown RBP7.35□□□□□ -1.23
DDX42-207ENST00000578593 UGT2B11O75310 529 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 IL18RAPO95256 599 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 PEX11BO96011 259 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 CHRNGP07510 517 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 ARF4P18085 180 aaPredicted RBP7.35□□□□□ -1.23
DDX42-207ENST00000578593 ITGB8P26012 769 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 HSD3B2P26439 372 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 CNTFP26441 200 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 MIPP30301 263 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 CD79BP40259 229 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 SNRPD2P62316 118 aaKnown RBP7.35□□□□□ -1.23
DDX42-207ENST00000578593 ERVK-25P63136 954 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 CLDN10P78369 228 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 RHDQ02161 417 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 DHCR24Q15392 516 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 TEAD4Q15561 434 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 RFX4Q33E94 735 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 CDC42EP5Q6NZY7 148 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 RSBN1LQ6PCB5 846 aaPredicted RBP7.35□□□□□ -1.23
DDX42-207ENST00000578593 C11orf88Q6PI97 169 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 CYP2R1Q6VVX0 501 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 USP53Q70EK8 1073 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 ATCAYQ86WG3 371 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 TMC8Q8IU68 726 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 PCDH20Q8N6Y1 951 aaKnown RBP7.35□□□□□ -1.23
DDX42-207ENST00000578593 BPIFB6Q8NFQ5 453 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 OR10J5Q8NHC4 309 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 RBPMSQ93062 196 aaKnown RBP7.35□□□□□ -1.23
DDX42-207ENST00000578593 CPNE4Q96A23 557 aaPredicted RBP7.35□□□□□ -1.23
DDX42-207ENST00000578593 PPWD1Q96BP3 646 aaKnown RBP7.35□□□□□ -1.23
DDX42-207ENST00000578593 BTN2A3PQ96KV6 586 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 MXRA8Q9BRK3 442 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 ERVK-6Q9BXR3 956 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 MIR1-1HGQ9H1L0 117 aa7.35□□□□□ -1.23
DDX42-207ENST00000578593 ITM2CQ9NQX7 267 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms