RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 RHBDD2Q6NTF9 364 aa16.05■□□□□ 0.16
CDK5RAP3-206ENST00000578018 MED25Q71SY5 747 aa16.05■□□□□ 0.16
CDK5RAP3-206ENST00000578018 PRUNE1Q86TP1 453 aa16.05■□□□□ 0.16
CDK5RAP3-206ENST00000578018 SLC13A5Q86YT5 568 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP3-206ENST00000578018 SLC22A15Q8IZD6 547 aa16.05■□□□□ 0.16
CDK5RAP3-206ENST00000578018 TMEM102Q8N9M5 508 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP3-206ENST00000578018 GLIS1Q8NBF1 620 aa16.05■□□□□ 0.16
CDK5RAP3-206ENST00000578018 FDCSPQ8NFU4 85 aa16.05■□□□□ 0.16
CDK5RAP3-206ENST00000578018 OR4L1Q8NH43 312 aa16.05■□□□□ 0.16
CDK5RAP3-206ENST00000578018 LKAAEAR1Q8TD35 194 aa16.05■□□□□ 0.16
CDK5RAP3-206ENST00000578018 C1orf54Q8WWF1 131 aa16.05■□□□□ 0.16
CDK5RAP3-206ENST00000578018 N4BP2L2Q92802 583 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP3-206ENST00000578018 TTC1Q99614 292 aa16.05■□□□□ 0.16
CDK5RAP3-206ENST00000578018 NUDT9Q9BW91 350 aa16.05■□□□□ 0.16
CDK5RAP3-206ENST00000578018 RAB6BQ9NRW1 208 aa16.05■□□□□ 0.16
CDK5RAP3-206ENST00000578018 ZNF148Q9UQR1 794 aa16.05■□□□□ 0.16
CDK5RAP3-206ENST00000578018 CDYLQ9Y232 598 aa16.05■□□□□ 0.16
CDK5RAP3-206ENST00000578018 TCAF1Q9Y4C2 921 aa16.05■□□□□ 0.16
CDK5RAP3-206ENST00000578018 ZNF451Q9Y4E5 1061 aa16.05■□□□□ 0.16
CDK5RAP3-206ENST00000578018 PCDHGB7Q9Y5F8 929 aa16.05■□□□□ 0.16
CDK5RAP3-206ENST00000578018 NUP210LQ5VU65 1888 aa16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 TTLL8A6PVC2 850 aa16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 F8W8V4 182 aa16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 ZSCAN9O15535 394 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 KLF7O75840 302 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 ETS1P14921 441 aa16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 UQCRFS1P47985 274 aa16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 CSE1LP55060 971 aaKnown RBP16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 PRAMEP78395 509 aa16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 NLRP9Q7RTR0 991 aa16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 MRGPREQ86SM8 312 aa16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 RAB43Q86YS6 212 aa16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 VRK3Q8IV63 474 aa16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 OR6P1Q8NGX9 317 aa16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 CPT1CQ8TCG5 803 aa16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 PROKR1Q8TCW9 393 aa16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 PEX13Q92968 403 aa16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 SGSM3Q96HU1 749 aa16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 GBP5Q96PP8 586 aa16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 C17orf62Q9BQA9 187 aa16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 MENTQ9BUN1 341 aa16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 AP1M1Q9BXS5 423 aa16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 SPRTNQ9H040 489 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP3-206ENST00000578018 ISM1B1AKI9 464 aa16.03■□□□□ 0.16
CDK5RAP3-206ENST00000578018 ZNF185O15231 689 aa16.03■□□□□ 0.16
CDK5RAP3-206ENST00000578018 KDM1AO60341 852 aa16.03■□□□□ 0.16
CDK5RAP3-206ENST00000578018 GPC4O75487 556 aa16.03■□□□□ 0.16
CDK5RAP3-206ENST00000578018 APRTP07741 180 aa16.03■□□□□ 0.16
CDK5RAP3-206ENST00000578018 RAB28P51157 221 aa16.03■□□□□ 0.16
CDK5RAP3-206ENST00000578018 RRADP55042 308 aa16.03■□□□□ 0.16
CDK5RAP3-206ENST00000578018 HSPA14Q0VDF9 509 aa16.03■□□□□ 0.16
CDK5RAP3-206ENST00000578018 SNX1Q13596 522 aa16.03■□□□□ 0.16
CDK5RAP3-206ENST00000578018 FASTKD1Q53R41 847 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-206ENST00000578018 C1orf189Q5VU69 101 aa16.03■□□□□ 0.16
CDK5RAP3-206ENST00000578018 DNAJC22Q8N4W6 341 aa16.03■□□□□ 0.16
CDK5RAP3-206ENST00000578018 EFCAB3Q8N7B9 438 aa16.03■□□□□ 0.16
CDK5RAP3-206ENST00000578018 CCDC89Q8N998 374 aa16.03■□□□□ 0.16
CDK5RAP3-206ENST00000578018 LINC01555Q8NAE3 123 aa16.03■□□□□ 0.16
CDK5RAP3-206ENST00000578018 GALNT11Q8NCW6 608 aa16.03■□□□□ 0.16
CDK5RAP3-206ENST00000578018 PPHLN1Q8NEY8 458 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-206ENST00000578018 TSGA10Q9BZW7 698 aa16.03■□□□□ 0.16
CDK5RAP3-206ENST00000578018 MARCH4Q9P2E8 410 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-206ENST00000578018 DHCR7Q9UBM7 475 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-206ENST00000578018 SRPK3Q9UPE1 567 aa16.03■□□□□ 0.16
CDK5RAP3-206ENST00000578018 IQCF5A8MTL0 148 aa16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 DPM1O60762 260 aa16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 MAGP20916 626 aa16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 OTX2P32243 289 aa16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 CCZ1BP86790 482 aa16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 CCZ1P86791 482 aaPredicted RBP16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 GRB7Q14451 532 aa16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 KYNUQ16719 465 aa16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 AARS2Q5JTZ9 985 aaKnown RBP16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 JMJD6Q6NYC1 403 aaPredicted RBP16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 UNC5DQ6UXZ4 953 aa16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 LDB1Q86U70 411 aaPredicted RBP16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 HPS6Q86YV9 775 aa16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 DCUN1D3Q8IWE4 304 aa16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 FAM20CQ8IXL6 584 aa16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 ZNF655Q8N720 491 aaPredicted RBP16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 Q8NA96 180 aa16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 ASZ1Q8WWH4 475 aa16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 CARD6Q9BX69 1037 aa16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 TSSK1BQ9BXA7 367 aa16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 CATSPERZQ9NTU4 200 aa16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 GPR83Q9NYM4 423 aa16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 PAK5Q9P286 719 aa16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 GUCA1BQ9UMX6 200 aa16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 G3BP2Q9UN86 482 aaKnown RBP16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 PLCL2Q9UPR0 1127 aa16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 MAP4K5Q9Y4K4 846 aa16.02■□□□□ 0.16
CDK5RAP3-206ENST00000578018 NBPF19A0A087WUL8 3843 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 A6NL46 340 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 NRDCO43847 1150 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 CNOT3O75175 753 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 VPS4BO75351 444 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 RPN2P04844 631 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 APOA4P06727 396 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 ZSCAN5DPP0CG00 497 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 GNLYP22749 145 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms