RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 NR1D1P20393 614 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 PDHA2P29803 388 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 CD151P48509 253 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 CSE1LP55060 971 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 RPS15P62841 145 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 PRAMEP78395 509 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 BASP1P80723 227 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 GSTM4Q03013 218 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 RPA4Q13156 261 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 ITIH4Q14624 930 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 OASLQ15646 514 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 FASTKD1Q53R41 847 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 AGBL2Q5U5Z8 902 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 IZUMO3Q5VZ72 239 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 BPHLQ86WA6 291 aaPredicted RBP9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 CCDC25Q86WR0 208 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 IQCKQ8N0W5 287 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 CARFQ8N187 725 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 D2HGDHQ8N465 521 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 PHC3Q8NDX5 983 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 PPHLN1Q8NEY8 458 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 OR6P1Q8NGX9 317 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 FBXO25Q8TCJ0 367 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 TFGQ92734 400 aaPredicted RBP9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 N4BP2L2Q92802 583 aaPredicted RBP9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 MR1Q95460 341 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 HDAC10Q969S8 669 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 PPM1MQ96MI6 270 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 FCRL4Q96PJ5 515 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 KLHL25Q9H0H3 589 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 ACTL8Q9H568 366 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 CLMPQ9H6B4 373 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 XKR8Q9H6D3 395 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 ZNF71Q9NQZ8 489 aaPredicted RBP9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 C1GALT1Q9NS00 363 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 SEMA5BQ9P283 1151 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 PAK5Q9P286 719 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 TUBD1Q9UJT1 453 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 ASF1AQ9Y294 204 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 BTRCQ9Y297 605 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 MAN2B2Q9Y2E5 1009 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 TDRKHQ9Y2W6 561 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 MYO18BQ8IUG5 2567 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 FER1L5A0AVI2 2057 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 MROH6A6NGR9 719 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 C2orf74A8MZ97 194 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 C21orf140B9A014 251 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 KDM1AO60341 852 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 CREG1O75629 220 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 GOT2P00505 430 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 KLK3P07288 261 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 CYP2A7P20853 494 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 ADRA1DP25100 572 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 FOXN2P32314 431 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 PPARGP37231 505 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 KCNJ1P48048 391 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 RPS18P62269 152 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 KCNC4Q03721 635 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 ZNF844Q08AG5 666 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 CRTC2Q53ET0 693 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 LACTB2Q53H82 288 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 TSTD2Q5T7W7 516 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 LYPLAL1Q5VWZ2 237 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 FAM199XQ6PEV8 388 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 ZDHHC24Q6UX98 284 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 PACS1Q6VY07 963 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 NAPRTQ6XQN6 538 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 PRUNE1Q86TP1 453 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 AMIGO1Q86WK6 493 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 OTUD6BQ8N6M0 293 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 OR5AR1Q8NGP9 310 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 OR13J1Q8NGT2 312 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 OR4L1Q8NH43 312 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 OR8K5Q8NH50 307 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 CPT1BQ92523 772 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 ZNF501Q96CX3 271 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 CLIP3Q96DZ5 547 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 CCDC77Q9BR77 488 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 TSSK1BQ9BXA7 367 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 CAPS2Q9BXY5 557 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 CNOT10Q9H9A5 744 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 SLC2A6Q9UGQ3 507 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 DRG1Q9Y295 367 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 TCAF1Q9Y4C2 921 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 PRSS21Q9Y6M0 314 aa9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 SETXQ7Z333 2677 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-216ENST00000574344 NUP210LQ5VU65 1888 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 PCM1Q15154 2024 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 MKRN2OSH3BPM6 223 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 BTN3A3O00478 584 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 SUV39H1O43463 412 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 OR1I1O60431 355 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 RFPL1O75677 317 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 SUN1O94901 812 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 WISP1O95388 367 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 FURINP09958 794 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 ATXN8OSP0DMR3 200 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 PVRP15151 417 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 ST6GAL1P15907 406 aa9.36□□□□□ -0.91
NPLOC4-216ENST00000574344 PRDX3P30048 256 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms