RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 AP3B1O00203 1094 aa16.82■□□□□ 0.28
SMG6-214ENST00000573827 GCGRP47871 477 aa16.82■□□□□ 0.28
SMG6-214ENST00000573827 RAB28P51157 221 aa16.82■□□□□ 0.28
SMG6-214ENST00000573827 PMS2P54278 862 aa16.82■□□□□ 0.28
SMG6-214ENST00000573827 UGT8Q16880 541 aa16.82■□□□□ 0.28
SMG6-214ENST00000573827 FAM69BQ5VUD6 431 aa16.82■□□□□ 0.28
SMG6-214ENST00000573827 ARMC3Q5W041 872 aa16.82■□□□□ 0.28
SMG6-214ENST00000573827 UNC5DQ6UXZ4 953 aa16.82■□□□□ 0.28
SMG6-214ENST00000573827 PRICKLE2Q7Z3G6 844 aa16.82■□□□□ 0.28
SMG6-214ENST00000573827 DNAJC22Q8N4W6 341 aa16.82■□□□□ 0.28
SMG6-214ENST00000573827 COG1Q8WTW3 980 aa16.82■□□□□ 0.28
SMG6-214ENST00000573827 MR1Q95460 341 aa16.82■□□□□ 0.28
SMG6-214ENST00000573827 KCNF1Q9H3M0 494 aa16.82■□□□□ 0.28
SMG6-214ENST00000573827 POLHQ9Y253 713 aa16.82■□□□□ 0.28
SMG6-214ENST00000573827 FARSAQ9Y285 508 aaKnown RBP16.82■□□□□ 0.28
SMG6-214ENST00000573827 TDRKHQ9Y2W6 561 aaKnown RBP16.82■□□□□ 0.28
SMG6-214ENST00000573827 A0A0J9YY10 115 aa16.81■□□□□ 0.28
SMG6-214ENST00000573827 GOLGA8KD6RF30 607 aa16.81■□□□□ 0.28
SMG6-214ENST00000573827 GOLGA8TH3BQL2 631 aa16.81■□□□□ 0.28
SMG6-214ENST00000573827 PRICKLE3O43900 615 aaPredicted RBP16.81■□□□□ 0.28
SMG6-214ENST00000573827 VAPBO95292 243 aa16.81■□□□□ 0.28
SMG6-214ENST00000573827 RAB40ALP0C0E4 278 aa16.81■□□□□ 0.28
SMG6-214ENST00000573827 PPARGP37231 505 aaPredicted RBP16.81■□□□□ 0.28
SMG6-214ENST00000573827 MAGEA3P43357 314 aa16.81■□□□□ 0.28
SMG6-214ENST00000573827 VPS41P49754 854 aa16.81■□□□□ 0.28
SMG6-214ENST00000573827 GPS1Q13098 491 aa16.81■□□□□ 0.28
SMG6-214ENST00000573827 KIR2DS3Q14952 304 aa16.81■□□□□ 0.28
SMG6-214ENST00000573827 SLC5A12Q1EHB4 618 aa16.81■□□□□ 0.28
SMG6-214ENST00000573827 KIAA0930Q6ICG6 404 aaPredicted RBP16.81■□□□□ 0.28
SMG6-214ENST00000573827 SYVN1Q86TM6 617 aa16.81■□□□□ 0.28
SMG6-214ENST00000573827 LRRC6Q86X45 466 aa16.81■□□□□ 0.28
SMG6-214ENST00000573827 PTRH1Q86Y79 214 aaKnown RBP16.81■□□□□ 0.28
SMG6-214ENST00000573827 APLFQ8IW19 511 aaPredicted RBP16.81■□□□□ 0.28
SMG6-214ENST00000573827 DCUN1D3Q8IWE4 304 aa16.81■□□□□ 0.28
SMG6-214ENST00000573827 FAM20CQ8IXL6 584 aa16.81■□□□□ 0.28
SMG6-214ENST00000573827 SYTL1Q8IYJ3 562 aa16.81■□□□□ 0.28
SMG6-214ENST00000573827 C9orf43Q8TAL5 461 aaPredicted RBP16.81■□□□□ 0.28
SMG6-214ENST00000573827 TCTN2Q96GX1 697 aa16.81■□□□□ 0.28
SMG6-214ENST00000573827 PBKQ96KB5 322 aa16.81■□□□□ 0.28
SMG6-214ENST00000573827 IL17FQ96PD4 163 aa16.81■□□□□ 0.28
SMG6-214ENST00000573827 TRIM55Q9BYV6 548 aa16.81■□□□□ 0.28
SMG6-214ENST00000573827 ACTR5Q9H9F9 607 aaPredicted RBP16.81■□□□□ 0.28
SMG6-214ENST00000573827 FANCEQ9HB96 536 aa16.81■□□□□ 0.28
SMG6-214ENST00000573827 ZNF71Q9NQZ8 489 aaPredicted RBP16.81■□□□□ 0.28
SMG6-214ENST00000573827 F8W8V4 182 aa16.8■□□□□ 0.28
SMG6-214ENST00000573827 ZNF749O43361 778 aa16.8■□□□□ 0.28
SMG6-214ENST00000573827 KRT14P02533 472 aa16.8■□□□□ 0.28
SMG6-214ENST00000573827 PDGFAP04085 211 aa16.8■□□□□ 0.28
SMG6-214ENST00000573827 APOA4P06727 396 aa16.8■□□□□ 0.28
SMG6-214ENST00000573827 COILP38432 576 aaPredicted RBP16.8■□□□□ 0.28
SMG6-214ENST00000573827 ADARP55265 1226 aaKnown RBP16.8■□□□□ 0.28
SMG6-214ENST00000573827 ITGA1P56199 1179 aa16.8■□□□□ 0.28
SMG6-214ENST00000573827 DEFB110Q30KQ9 67 aa16.8■□□□□ 0.28
SMG6-214ENST00000573827 PTCHD3Q3KNS1 767 aa16.8■□□□□ 0.28
SMG6-214ENST00000573827 CCSMST1Q4G0I0 132 aa16.8■□□□□ 0.28
SMG6-214ENST00000573827 ATG14Q6ZNE5 492 aa16.8■□□□□ 0.28
SMG6-214ENST00000573827 CENPUQ71F23 418 aa16.8■□□□□ 0.28
SMG6-214ENST00000573827 ENDOVQ8N8Q3 282 aaKnown RBP16.8■□□□□ 0.28
SMG6-214ENST00000573827 MCUQ8NE86 351 aa16.8■□□□□ 0.28
SMG6-214ENST00000573827 DENND1AQ8TEH3 1009 aa16.8■□□□□ 0.28
SMG6-214ENST00000573827 MAGOHBQ96A72 148 aaKnown RBP16.8■□□□□ 0.28
SMG6-214ENST00000573827 NLNQ9BYT8 704 aa16.8■□□□□ 0.28
SMG6-214ENST00000573827 TRIM4Q9C037 500 aa16.8■□□□□ 0.28
SMG6-214ENST00000573827 SPRTNQ9H040 489 aaPredicted RBP16.8■□□□□ 0.28
SMG6-214ENST00000573827 ENAMQ9NRM1 1142 aa16.8■□□□□ 0.28
SMG6-214ENST00000573827 CIDEBQ9UHD4 219 aa16.8■□□□□ 0.28
SMG6-214ENST00000573827 ANAPC5Q9UJX4 755 aa16.8■□□□□ 0.28
SMG6-214ENST00000573827 MED16Q9Y2X0 877 aa16.8■□□□□ 0.28
SMG6-214ENST00000573827 HEMK1Q9Y5R4 338 aaPredicted RBP16.8■□□□□ 0.28
SMG6-214ENST00000573827 NFS1Q9Y697 457 aa16.8■□□□□ 0.28
SMG6-214ENST00000573827 ANKRD12Q6UB98 2062 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 ZCWPW2A0A1B0GU75 182 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 KRT87PA6NCN2 255 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 DNAJB5O75953 348 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 WISP1O95388 367 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 MLNP12872 115 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 CYP2A7P20853 494 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 CD9P21926 228 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 CPZQ66K79 652 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 PTRHD1Q6GMV3 140 aaKnown RBP16.79■□□□□ 0.28
SMG6-214ENST00000573827 SPNS2Q8IVW8 549 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 SLC35F6Q8N357 371 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 OR2L8Q8NGY9 312 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 ACTRT1Q8TDG2 376 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 SERPINB12Q96P63 405 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 GBP5Q96PP8 586 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 TSSK1BQ9BXA7 367 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 GRPEL1Q9HAV7 217 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 GALPQ9UBC7 116 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 GNPTGQ9UJJ9 305 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 SERTAD3Q9UJW9 196 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 TLK1Q9UKI8 766 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 TCFL5Q9UL49 500 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 RUVBL2Q9Y230 463 aaKnown RBP16.79■□□□□ 0.28
SMG6-214ENST00000573827 TP53TG5Q9Y2B4 290 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 KLHL20Q9Y2M5 609 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 NAV2Q8IVL1 2488 aa16.79■□□□□ 0.28
SMG6-214ENST00000573827 FAM237BA0A1B0GVD1 139 aa16.78■□□□□ 0.28
SMG6-214ENST00000573827 E7EQ34 232 aa16.78■□□□□ 0.28
SMG6-214ENST00000573827 RASGRF2O14827 1237 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms