RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 PGLSO95336 258 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ZIC2O95409 532 aaPredicted RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 PENKP01210 267 aaPredicted RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 PROCP04070 461 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ERBB2P04626 1255 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 EIF2S1P05198 315 aaKnown RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 ADH1AP07327 375 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 GLI1P08151 1106 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 CALCBP10092 127 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 APEHP13798 732 aaKnown RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 SELLP14151 372 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ATF2P15336 505 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 CD19P15391 556 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ATF6P18850 670 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 NFKB1P19838 968 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 PTNP21246 168 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 LMO2P25791 158 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ARNTP27540 789 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 GABRB3P28472 473 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 CD52P31358 61 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 SLC5A2P31639 672 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 GRK4P32298 578 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 CTNNB1P35222 781 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 GCKP35557 465 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ECI1P42126 302 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 LEPRP48357 1165 aaKnown RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 FHITP49789 147 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 RGS7P49802 495 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ARHGDIAP52565 204 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 HK3P52790 923 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 NDST1P52848 882 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 BCAT1P54687 386 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 INHBCP55103 352 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 CDH6P55285 790 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ST8SIA6P61647 398 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 RPS16P62249 146 aaKnown RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 GPC5P78333 572 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 PDE1BQ01064 536 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 CDC20Q12834 499 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 SNTB2Q13425 540 aaKnown RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 DGCR6Q14129 220 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 KCNAB1Q14722 419 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 CEBPEQ15744 281 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 PTGISQ16647 500 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 IFI16Q16666 785 aaKnown RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 NDUFA5Q16718 116 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 GAB4Q2WGN9 574 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 DCAF4L1Q3SXM0 396 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 PTPN20Q4JDL3 420 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 DNAL1Q4LDG9 190 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 CT83Q5H943 113 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ZNF311Q5JNZ3 666 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 C3orf38Q5JPI3 329 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 TMEM31Q5JXX7 168 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 SPDYAQ5MJ70 313 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 WIPI1Q5MNZ9 446 aaPredicted RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 GCNT6Q5T4J0 391 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 C9orf57Q5W0N0 161 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 KCTD11Q693B1 232 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 TXNRD3NBQ6F5E7 133 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 KIAA1161Q6NSJ0 714 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 TRNP1Q6NT89 227 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ARMC6Q6NXE6 501 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 SLC27A1Q6PCB7 646 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ARSKQ6UWY0 536 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 CCNI2Q6ZMN8 369 aaPredicted RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 RBPMS2Q6ZRY4 209 aaKnown RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 CCDC121Q6ZUS5 278 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 MTSS1LQ765P7 747 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 TRIM46Q7Z4K8 759 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 CTU1Q7Z7A3 348 aaKnown RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 CROCCP2Q86T23 111 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ACOT1Q86TX2 421 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 SERINC5Q86VE9 423 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 PHF13Q86YI8 300 aaPredicted RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 RHOT2Q8IXI1 618 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 CLYBLQ8N0X4 340 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 BATF2Q8N1L9 274 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 GHDCQ8N2G8 530 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 SH2D3CQ8N5H7 860 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ZNF781Q8N8C0 355 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 C12orf29Q8N999 325 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 FNDC5Q8NAU1 212 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ZNF511Q8NB15 262 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 NHLRC2Q8NBF2 726 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 OR52E1Q8NGJ3 308 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 JOSD2Q8TAC2 188 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ZCCHC10Q8TBK6 192 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 RAET1EQ8TD07 263 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 CD300LFQ8TDQ1 290 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ELP5Q8TE02 316 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 KBTBD7Q8WVZ9 684 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ATL1Q8WXF7 558 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 LINC01599Q8WXQ3 324 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 RSC1A1Q92681 617 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 BCL2L2Q92843 193 aaPredicted RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 CD101Q93033 1021 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 C3orf49Q96BT1 292 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 SPDL1Q96EA4 605 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 RNF31Q96EP0 1072 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms