RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 FKBP9O95302 570 aa22.79■■□□□ 1.24
RAB40C-212ENST00000569575 CCND1P24385 295 aa22.79■■□□□ 1.24
RAB40C-212ENST00000569575 MAZP56270 477 aaKnown RBP22.79■■□□□ 1.24
RAB40C-212ENST00000569575 GPR18Q14330 331 aa22.79■■□□□ 1.24
RAB40C-212ENST00000569575 TGFBIQ15582 683 aa22.79■■□□□ 1.24
RAB40C-212ENST00000569575 ANKS6Q68DC2 871 aa22.79■■□□□ 1.24
RAB40C-212ENST00000569575 PLD6Q8N2A8 252 aaKnown RBP22.79■■□□□ 1.24
RAB40C-212ENST00000569575 OR52E1Q8NGJ3 308 aa22.79■■□□□ 1.24
RAB40C-212ENST00000569575 LCN9Q8WX39 176 aa22.79■■□□□ 1.24
RAB40C-212ENST00000569575 SLC22A18Q96BI1 424 aa22.79■■□□□ 1.24
RAB40C-212ENST00000569575 TLCD1Q96CP7 247 aa22.79■■□□□ 1.24
RAB40C-212ENST00000569575 CCDC126Q96EE4 140 aa22.79■■□□□ 1.24
RAB40C-212ENST00000569575 ATP6V1G3Q96LB4 118 aa22.79■■□□□ 1.24
RAB40C-212ENST00000569575 ATOH8Q96SQ7 321 aa22.79■■□□□ 1.24
RAB40C-212ENST00000569575 RAB33BQ9H082 229 aa22.79■■□□□ 1.24
RAB40C-212ENST00000569575 ARL15Q9NXU5 204 aa22.79■■□□□ 1.24
RAB40C-212ENST00000569575 NUDT4Q9NZJ9 180 aa22.79■■□□□ 1.24
RAB40C-212ENST00000569575 ADAMTS6Q9UKP5 1117 aa22.79■■□□□ 1.24
RAB40C-212ENST00000569575 BTBD3Q9Y2F9 522 aa22.79■■□□□ 1.24
RAB40C-212ENST00000569575 PCDHGA1Q9Y5H4 931 aa22.79■■□□□ 1.24
RAB40C-212ENST00000569575 LY6G6EA0A0G2JKS1 128 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 NPEPPSL1A6NEC2 478 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 GDF9O60383 454 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 SASH3O75995 380 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 S100BP04271 92 aaPredicted RBP22.78■■□□□ 1.24
RAB40C-212ENST00000569575 TPBGLP0DKB5 382 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 ERGP11308 486 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 TAC1P20366 129 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 NAA20P61599 178 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 PLCL1Q15111 1095 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 CYP2A13Q16696 494 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 TECRLQ5HYJ1 363 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 SULT1C3Q6IMI6 304 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 OR10G6Q8NH81 332 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 DLG3Q92796 817 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 PTERQ96BW5 349 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 FBXL8Q96CD0 374 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 SRMSQ9H3Y6 488 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 ALG9Q9H6U8 611 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 CNOT10Q9H9A5 744 aaKnown RBP22.78■■□□□ 1.24
RAB40C-212ENST00000569575 MED4Q9NPJ6 270 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 TDRKHQ9Y2W6 561 aaKnown RBP22.78■■□□□ 1.24
RAB40C-212ENST00000569575 PLLPQ9Y342 182 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 RNF215Q9Y6U7 377 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 U3KQA8 63 aa22.78■■□□□ 1.24
RAB40C-212ENST00000569575 TM9SF1O15321 606 aa22.77■■□□□ 1.24
RAB40C-212ENST00000569575 PRPF4O43172 522 aaKnown RBP eCLIP22.77■■□□□ 1.242e-7■■■■■ 34.8
RAB40C-212ENST00000569575 IPO13O94829 963 aaKnown RBP22.77■■□□□ 1.24
RAB40C-212ENST00000569575 E2F1Q01094 437 aa22.77■■□□□ 1.24
RAB40C-212ENST00000569575 GRB7Q14451 532 aa22.77■■□□□ 1.24
RAB40C-212ENST00000569575 HSP90B2PQ58FF3 399 aa22.77■■□□□ 1.24
RAB40C-212ENST00000569575 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.77■■□□□ 1.24
RAB40C-212ENST00000569575 AMIGO1Q86WK6 493 aa22.77■■□□□ 1.24
RAB40C-212ENST00000569575 C4orf33Q8N1A6 199 aa22.77■■□□□ 1.24
RAB40C-212ENST00000569575 SPATA6LQ8N4H0 392 aa22.77■■□□□ 1.24
RAB40C-212ENST00000569575 PDPRQ8NCN5 879 aa22.77■■□□□ 1.24
RAB40C-212ENST00000569575 OR2L8Q8NGY9 312 aa22.77■■□□□ 1.24
RAB40C-212ENST00000569575 SCYL1Q96KG9 808 aa22.77■■□□□ 1.24
RAB40C-212ENST00000569575 HGH1Q9BTY7 390 aa22.77■■□□□ 1.24
RAB40C-212ENST00000569575 TWSG1Q9GZX9 223 aa22.77■■□□□ 1.24
RAB40C-212ENST00000569575 PCBD2Q9H0N5 130 aa22.77■■□□□ 1.24
RAB40C-212ENST00000569575 KCNK4Q9NYG8 393 aa22.77■■□□□ 1.24
RAB40C-212ENST00000569575 VPS13AQ96RL7 3174 aa22.77■■□□□ 1.23
RAB40C-212ENST00000569575 SLC30A4O14863 429 aa22.76■■□□□ 1.23
RAB40C-212ENST00000569575 TYROBPO43914 113 aa22.76■■□□□ 1.23
RAB40C-212ENST00000569575 KLK8O60259 260 aa22.76■■□□□ 1.23
RAB40C-212ENST00000569575 GGT5P36269 586 aa22.76■■□□□ 1.23
RAB40C-212ENST00000569575 PRKG2Q13237 762 aa22.76■■□□□ 1.23
RAB40C-212ENST00000569575 OR4D1Q15615 310 aa22.76■■□□□ 1.23
RAB40C-212ENST00000569575 PHKG1Q16816 387 aa22.76■■□□□ 1.23
RAB40C-212ENST00000569575 DUS1LQ6P1R4 473 aaKnown RBP22.76■■□□□ 1.23
RAB40C-212ENST00000569575 CARFQ8N187 725 aa22.76■■□□□ 1.23
RAB40C-212ENST00000569575 PKP4Q99569 1192 aa22.76■■□□□ 1.23
RAB40C-212ENST00000569575 MENTQ9BUN1 341 aa22.76■■□□□ 1.23
RAB40C-212ENST00000569575 TMEM216Q9P0N5 145 aa22.76■■□□□ 1.23
RAB40C-212ENST00000569575 EPHA6Q9UF33 1036 aa22.76■■□□□ 1.23
RAB40C-212ENST00000569575 RAPGEFL1Q9UHV5 662 aa22.76■■□□□ 1.23
RAB40C-212ENST00000569575 TNPO3Q9Y5L0 923 aaKnown RBP22.76■■□□□ 1.23
RAB40C-212ENST00000569575 CPED1A4D0V7 1026 aa22.75■■□□□ 1.23
RAB40C-212ENST00000569575 SMIM24O75264 130 aa22.75■■□□□ 1.23
RAB40C-212ENST00000569575 UBXN7O94888 489 aa22.75■■□□□ 1.23
RAB40C-212ENST00000569575 ZWINTO95229 277 aa22.75■■□□□ 1.23
RAB40C-212ENST00000569575 SYF2O95926 243 aaKnown RBP22.75■■□□□ 1.23
RAB40C-212ENST00000569575 PKLRP30613 574 aa22.75■■□□□ 1.23
RAB40C-212ENST00000569575 BDKRB1P46663 353 aa22.75■■□□□ 1.23
RAB40C-212ENST00000569575 GLRBP48167 497 aa22.75■■□□□ 1.23
RAB40C-212ENST00000569575 PRKAA1Q13131 559 aa22.75■■□□□ 1.23
RAB40C-212ENST00000569575 N4BP2L1Q5TBK1 243 aaPredicted RBP22.75■■□□□ 1.23
RAB40C-212ENST00000569575 EFL1Q7Z2Z2 1120 aaKnown RBP22.75■■□□□ 1.23
RAB40C-212ENST00000569575 OOSP2Q86WS3 158 aa22.75■■□□□ 1.23
RAB40C-212ENST00000569575 SLC22A9Q8IVM8 553 aa22.75■■□□□ 1.23
RAB40C-212ENST00000569575 KIAA2013Q8IYS2 634 aa22.75■■□□□ 1.23
RAB40C-212ENST00000569575 SMPDL3AQ92484 453 aa22.75■■□□□ 1.23
RAB40C-212ENST00000569575 CD274Q9NZQ7 290 aa22.75■■□□□ 1.23
RAB40C-212ENST00000569575 XPR1Q9UBH6 696 aa22.75■■□□□ 1.23
RAB40C-212ENST00000569575 TSR3Q9UJK0 312 aaKnown RBP22.75■■□□□ 1.23
RAB40C-212ENST00000569575 PTPRZ1P23471 2315 aaPredicted RBP22.75■■□□□ 1.23
RAB40C-212ENST00000569575 USP34Q70CQ2 3546 aa22.74■■□□□ 1.23
RAB40C-212ENST00000569575 TARM1B6A8C7 271 aa22.74■■□□□ 1.23
RAB40C-212ENST00000569575 TM4SF5O14894 197 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms