RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 OR52A5Q9H2C5 316 aa14.08□□□□□ -0.16
COMMD4-225ENST00000569245 SRMSQ9H3Y6 488 aa14.08□□□□□ -0.16
COMMD4-225ENST00000569245 NSMCE4AQ9NXX6 385 aa14.08□□□□□ -0.16
COMMD4-225ENST00000569245 SSUH2Q9Y2M2 353 aa14.08□□□□□ -0.16
COMMD4-225ENST00000569245 MGAQ8IWI9 3026 aa14.08□□□□□ -0.16
COMMD4-225ENST00000569245 PTPRQQ9UMZ3 2332 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 CXorf49A8MYA2 514 aaPredicted RBP14.07□□□□□ -0.16
COMMD4-225ENST00000569245 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.07□□□□□ -0.16
COMMD4-225ENST00000569245 RASGRF2O14827 1237 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 CD3EAPO15446 510 aaKnown RBP14.07□□□□□ -0.16
COMMD4-225ENST00000569245 EFSO43281 561 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 RAD1O60671 282 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 POLR2CP19387 275 aaPredicted RBP14.07□□□□□ -0.16
COMMD4-225ENST00000569245 GCAP28676 217 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 TTPAP49638 278 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 CSE1LP55060 971 aaKnown RBP14.07□□□□□ -0.16
COMMD4-225ENST00000569245 PRKG2Q13237 762 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 THOC5Q13769 683 aaKnown RBP14.07□□□□□ -0.16
COMMD4-225ENST00000569245 TAF1BQ53T94 588 aaPredicted RBP14.07□□□□□ -0.16
COMMD4-225ENST00000569245 HSP90AA5PQ58FG0 334 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 CEP85LQ5SZL2 805 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 TEDDM1Q5T9Z0 273 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 NEPROQ6NW34 567 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 NAPRTQ6XQN6 538 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 LDB1Q86U70 411 aaPredicted RBP14.07□□□□□ -0.16
COMMD4-225ENST00000569245 SLC26A11Q86WA9 606 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 RASGRP3Q8IV61 690 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 CACNA2D3Q8IZS8 1091 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 CNPY4Q8N129 248 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 RIBC1Q8N443 379 aaPredicted RBP14.07□□□□□ -0.16
COMMD4-225ENST00000569245 SIDT2Q8NBJ9 832 aaKnown RBP14.07□□□□□ -0.16
COMMD4-225ENST00000569245 CALML6Q8TD86 181 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 SLC44A1Q8WWI5 657 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 KLHL6Q8WZ60 621 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 NKD1Q969G9 470 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 SH3GL2Q99962 352 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 FAM167BQ9BTA0 163 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 MVB12BQ9H7P6 319 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 PPANQ9NQ55 473 aaKnown RBP14.07□□□□□ -0.16
COMMD4-225ENST00000569245 EURLQ9NYK6 297 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 IL1RAPL1Q9NZN1 696 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 ZFATQ9P243 1243 aa14.07□□□□□ -0.16
COMMD4-225ENST00000569245 AHCTF1Q8WYP5 2266 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 IGHV5-51A0A0C4DH38 117 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 GSAPA4D1B5 854 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 POC1B-GALNT4F8VUJ3 575 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 CDH16O75309 829 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 NDUFS3O75489 264 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 STK17BO94768 372 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 NELFEP18615 380 aaKnown RBP14.06□□□□□ -0.16
COMMD4-225ENST00000569245 MSH2P43246 934 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 RHDQ02161 417 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 PLOD1Q02809 727 aaPredicted RBP14.06□□□□□ -0.16
COMMD4-225ENST00000569245 SEMA3AQ14563 771 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 IL11RAQ14626 422 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 EFTUD2Q15029 972 aaKnown RBP eCLIP14.06□□□□□ -0.161e-7■■■■■ 52.3
COMMD4-225ENST00000569245 ZNF658BQ4V348 819 aaPredicted RBP14.06□□□□□ -0.16
COMMD4-225ENST00000569245 KIAA1614Q5VZ46 1190 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 PTRHD1Q6GMV3 140 aaKnown RBP14.06□□□□□ -0.16
COMMD4-225ENST00000569245 CYB5D1Q6P9G0 228 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 ADGRD1Q6QNK2 874 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 KIAA0408Q6ZU52 694 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 GALNT7Q86SF2 657 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 CTAGE3PQ8IX95 158 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 NLGN4XQ8N0W4 816 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 PPM1NQ8N819 430 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 NLGN4YQ8NFZ3 816 aaPredicted RBP14.06□□□□□ -0.16
COMMD4-225ENST00000569245 EPS8L3Q8TE67 593 aaKnown RBP14.06□□□□□ -0.16
COMMD4-225ENST00000569245 DCAKDQ8WVC6 231 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 RNF31Q96EP0 1072 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 BBC3Q96PG8 261 aaPredicted RBP14.06□□□□□ -0.16
COMMD4-225ENST00000569245 CD180Q99467 661 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 PAFAH2Q99487 392 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 MAP3K3Q99759 626 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 HGH1Q9BTY7 390 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 ULBP3Q9BZM4 244 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 IARS2Q9NSE4 1012 aaKnown RBP14.06□□□□□ -0.16
COMMD4-225ENST00000569245 SIDT1Q9NXL6 827 aaKnown RBP14.06□□□□□ -0.16
COMMD4-225ENST00000569245 MARCH4Q9P2E8 410 aaPredicted RBP14.06□□□□□ -0.16
COMMD4-225ENST00000569245 ZNF180Q9UJW8 692 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 PILRAQ9UKJ1 303 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 ASF1AQ9Y294 204 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 CACNA1GO43497 2377 aa14.06□□□□□ -0.16
COMMD4-225ENST00000569245 TLCD2A6NGC4 264 aa14.05□□□□□ -0.16
COMMD4-225ENST00000569245 ERVH48-1M5A8F1 160 aa14.05□□□□□ -0.16
COMMD4-225ENST00000569245 INHBAP08476 426 aa14.05□□□□□ -0.16
COMMD4-225ENST00000569245 OGNP20774 298 aaKnown RBP14.05□□□□□ -0.16
COMMD4-225ENST00000569245 MAP4P27816 1152 aaKnown RBP14.05□□□□□ -0.16
COMMD4-225ENST00000569245 HSD11B2P80365 405 aa14.05□□□□□ -0.16
COMMD4-225ENST00000569245 HSPA14Q0VDF9 509 aa14.05□□□□□ -0.16
COMMD4-225ENST00000569245 KCNAB1Q14722 419 aa14.05□□□□□ -0.16
COMMD4-225ENST00000569245 KRT71Q3SY84 523 aa14.05□□□□□ -0.16
COMMD4-225ENST00000569245 MRNIPQ6NTE8 343 aa14.05□□□□□ -0.16
COMMD4-225ENST00000569245 SDCCAG8Q86SQ7 713 aaPredicted RBP14.05□□□□□ -0.16
COMMD4-225ENST00000569245 AMIGO1Q86WK6 493 aa14.05□□□□□ -0.16
COMMD4-225ENST00000569245 C2CD4AQ8NCU7 369 aaPredicted RBP14.05□□□□□ -0.16
COMMD4-225ENST00000569245 OR52E1Q8NGJ3 308 aa14.05□□□□□ -0.16
COMMD4-225ENST00000569245 SNRNP27Q8WVK2 155 aaKnown RBP14.05□□□□□ -0.16
COMMD4-225ENST00000569245 KIAA1143Q96AT1 154 aaPredicted RBP14.05□□□□□ -0.16
COMMD4-225ENST00000569245 CPNE1Q99829 537 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms