RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	UGT3A1	Q6NUS8	523 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	FBXO38	Q6PIJ6	1188 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	SYDE1	Q6ZW31	735 aa	Predicted RBP	10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	ZNF843	Q8N446	348 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	C19orf47	Q8N9M1	422 aa	Known RBP	10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	ZNF501	Q96CX3	271 aa	Predicted RBP	10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	CAPZA3	Q96KX2	299 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	SERPINB12	Q96P63	405 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	TRAPPC9	Q96Q05	1148 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	NAPG	Q99747	312 aa	Predicted RBP	10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	DPH2	Q9BQC3	489 aa	Predicted RBP	10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	FAM167B	Q9BTA0	163 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	PITPNM3	Q9BZ71	974 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	TWSG1	Q9GZX9	223 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	P2RY12	Q9H244	342 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	FAM114A2	Q9NRY5	505 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	C20orf96	Q9NUD7	363 aa	Predicted RBP	10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	TXLNG	Q9NUQ3	528 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	MARCH4	Q9P2E8	410 aa	Predicted RBP	10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	RNF14	Q9UBS8	474 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	GPN3	Q9UHW5	284 aa	Predicted RBP	10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	G3BP2	Q9UN86	482 aa	Known RBP	10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	POLH	Q9Y253	713 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	PADI2	Q9Y2J8	665 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	COMMD10	Q9Y6G5	202 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	ZFYVE26	Q68DK2	2539 aa		10.02	□□□□□ -0.8
UBR1-207	ENST00000568782	ZFHX4	Q86UP3	3567 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	PABPN1L	A6NDY0	278 aa	Known RBP	10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	ZNF839	A8K0R7	811 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782		B8ZZF3	427 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	CCDC188	H7C350	402 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	MEN1	O00255	615 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	RASGRF2	O14827	1237 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	ZNF185	O15231	689 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	SNRNP200	O75643	2136 aa	Known RBP	10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	OR2B3	O76000	313 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	FKBP9	O95302	570 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	FAM87A	P0C7U9	286 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	PKM	P14618	531 aa	Known RBP	10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	WT1	P19544	449 aa	Predicted RBP	10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	CD9	P21926	228 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	PTPN4	P29074	926 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	POLE2	P56282	527 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	NFATC3	Q12968	1075 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	KYNU	Q16719	465 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	ZC3H12B	Q5HYM0	836 aa	Known RBP	10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	ANKRD22	Q5VYY1	191 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	TLDC1	Q6P9B6	456 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	CNST	Q6PJW8	725 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	MICALCL	Q6ZW33	695 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	SYVN1	Q86TM6	617 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	CAND1	Q86VP6	1230 aa	Known RBP	10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	CILP2	Q8IUL8	1156 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	PALM2	Q8IXS6	379 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	PDIK1L	Q8N165	341 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	ZBTB2	Q8N680	514 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	CT55	Q8WUE5	264 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	RNF31	Q96EP0	1072 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	LRFN5	Q96NI6	719 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	OR2A14	Q96R47	310 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	NDC1	Q9BTX1	674 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	KLHL25	Q9H0H3	589 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	DDX47	Q9H0S4	455 aa	Known RBP	10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	SLC25A18	Q9H1K4	315 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	KCNF1	Q9H3M0	494 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	PPAN	Q9NQ55	473 aa	Known RBP	10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	GEMIN8	Q9NWZ8	242 aa	Known RBP	10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	UTP6	Q9NYH9	597 aa	Known RBP	10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	IL17B	Q9UHF5	180 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	PCYOX1	Q9UHG3	505 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	TUBD1	Q9UJT1	453 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	PLAGL1	Q9UM63	463 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	SRPK3	Q9UPE1	567 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	FARSA	Q9Y285	508 aa	Known RBP	10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	PCDHGA6	Q9Y5G7	932 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	COL6A6	A6NMZ7	2263 aa		10.02	□□□□□ -0.81
UBR1-207	ENST00000568782	SEC16A	O15027	2179 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	IGSF10	Q6WRI0	2623 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	CDC14C	A4D256	554 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	MKRN2OS	H3BPM6	223 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	DNALI1	O14645	258 aa	Predicted RBP	10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	ZNF749	O43361	778 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	TMEM63A	O94886	807 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	TIAF1	O95411	115 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	CAT	P04040	527 aa	Known RBP	10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	PIM1	P11309	404 aa	Predicted RBP	10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	PVR	P15151	417 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	PGAM1	P18669	254 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	OAS2	P29728	719 aa	Known RBP	10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	ATP5D	P30049	168 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	PKLR	P30613	574 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	HSD17B2	P37059	387 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	DR1	Q01658	176 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	KCNAB2	Q13303	367 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	LINC00303	Q3SY05	128 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	IZUMO3	Q5VZ72	239 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	LRRC8E	Q6NSJ5	796 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	FAM199X	Q6PEV8	388 aa	Predicted RBP	10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	PCSK4	Q6UW60	755 aa		10.01	□□□□□ -0.81

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