RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 TEX15Q9BXT5 2789 aa8.4□□□□□ -1.06
KLHDC4-220ENST00000568338 PTPN13Q12923 2485 aa8.4□□□□□ -1.07
KLHDC4-220ENST00000568338 TEP1Q99973 2627 aaKnown RBP8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 CEP192Q8TEP8 1941 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 A0A1B0GTQ1 180 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 C17orf113A0A1B0GUU1 675 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 A0A1W2PPC4 97 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 POM121BA6NF01 834 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 SYCE1LA8MT33 242 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 LIN7AO14910 233 aaPredicted RBP8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 KMOO15229 486 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 BIRC5O15392 142 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 GRID2O43424 1007 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 ZBTB14O43829 449 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 KERAO60938 352 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 BPGMP07738 259 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 MPC1LP0DKB6 136 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 MYL2P10916 166 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 NEFHP12036 1026 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 GP1BBP13224 206 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 CPA3P15088 417 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 TAC1P20366 129 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 CD27P26842 260 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 HTR1BP28222 390 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 PBLDP30039 288 aaPredicted RBP8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 MAPK9P45984 424 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 RABIFP47224 123 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 THOP1P52888 689 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 CLDN2P57739 230 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 PFN3P60673 137 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 YPEL5P62699 121 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 GNGT1P63211 74 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 HSPA14Q0VDF9 509 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 ILKQ13418 452 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 GBX1Q14549 363 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 PCLAFQ15004 111 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 PDK4Q16654 411 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 ACSBG2Q5FVE4 666 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 ZNF787Q6DD87 383 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 ZYG11AQ6WRX3 759 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 ATG14Q6ZNE5 492 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 NEK10Q6ZWH5 1172 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 PIWIL4Q7Z3Z4 852 aaKnown RBP8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 ABI3BPQ7Z7G0 1075 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 ADAMTSL2Q86TH1 951 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 OXR1Q8N573 874 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 EID2Q8N6I1 236 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 BEND7Q8N7W2 519 aaPredicted RBP8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 OR56A4Q8NGH8 313 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 OR2L2Q8NH16 312 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 RAB3IL1Q8TBN0 382 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 STAG3L4Q8TBR4 150 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 LRRC8CQ8TDW0 803 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 CKAP2Q8WWK9 683 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 GLMNQ92990 594 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 TMEM159Q96B96 161 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 SKA1Q96BD8 255 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 CCDC126Q96EE4 140 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 MAGEB18Q96M61 343 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 WDR92Q96MX6 357 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 DPH1Q9BZG8 443 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 UNKQ9C0B0 810 aaKnown RBP8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 CCDC134Q9H6E4 229 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 ALG9Q9H6U8 611 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 CPSF2Q9P2I0 782 aaKnown RBP8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 ANKMY1Q9P2S6 941 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 RNF112Q9ULX5 631 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 SLC17A4Q9Y2C5 497 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 DNMT3AQ9Y6K1 912 aaPredicted RBP8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 SLCO1B1Q9Y6L6 691 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 COL12A1Q99715 3063 aa8.39□□□□□ -1.07
KLHDC4-220ENST00000568338 PRSS38A1L453 326 aa8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 WDR91A4D1P6 747 aa8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 PABPN1LA6NDY0 278 aaKnown RBP8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 NPEPPSL1A6NEC2 478 aa8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 MGAT4DA6NG13 374 aa8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 TMEM202A6NGA9 273 aa8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 TARM1B6A8C7 271 aa8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 YKT6O15498 198 aa8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 SHOX2O60902 331 aaPredicted RBP8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 H2AFYO75367 372 aaKnown RBP8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 GPC4O75487 556 aa8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 POP7O75817 140 aaKnown RBP8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 SLCO2B1O94956 709 aa8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 CEACAM5P06731 702 aa8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 VCLP18206 1134 aa8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 ATP5F1P24539 256 aaPredicted RBP8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 ALDH3A1P30838 453 aa8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 LSP1P33241 339 aa8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 PRKAA2P54646 552 aa8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 CBX1P83916 185 aa8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 ASPHQ12797 758 aa8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 RPA4Q13156 261 aa8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 SP140Q13342 867 aa8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 PTK2BQ14289 1009 aa8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 TSNQ15631 228 aaKnown RBP8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 PLA2G4EQ3MJ16 856 aa8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 ZNF658BQ4V348 819 aaPredicted RBP8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 TTC19Q6DKK2 380 aaPredicted RBP8.38□□□□□ -1.07
KLHDC4-220ENST00000568338 FRA10AC1Q70Z53 315 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms