RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 FAM87AP0C7U9 286 aa24.35■■□□□ 1.49
FANCA-228ENST00000567943 PKMP14618 531 aaKnown RBP24.35■■□□□ 1.49
FANCA-228ENST00000567943 PVRP15151 417 aa24.35■■□□□ 1.49
FANCA-228ENST00000567943 CDH3P22223 829 aa24.35■■□□□ 1.49
FANCA-228ENST00000567943 SHMT2P34897 504 aa24.35■■□□□ 1.49
FANCA-228ENST00000567943 ITGA8P53708 1063 aa24.35■■□□□ 1.49
FANCA-228ENST00000567943 CRYMQ14894 314 aa24.35■■□□□ 1.49
FANCA-228ENST00000567943 HIBCHQ6NVY1 386 aaPredicted RBP24.35■■□□□ 1.49
FANCA-228ENST00000567943 BPHLQ86WA6 291 aaPredicted RBP24.35■■□□□ 1.49
FANCA-228ENST00000567943 PDIK1LQ8N165 341 aa24.35■■□□□ 1.49
FANCA-228ENST00000567943 SPATA4Q8NEY3 305 aa24.35■■□□□ 1.49
FANCA-228ENST00000567943 KIAA1143Q96AT1 154 aaPredicted RBP24.35■■□□□ 1.49
FANCA-228ENST00000567943 SNF8Q96H20 258 aa24.35■■□□□ 1.49
FANCA-228ENST00000567943 FCRL4Q96PJ5 515 aa24.35■■□□□ 1.49
FANCA-228ENST00000567943 SPHK1Q9NYA1 384 aa24.35■■□□□ 1.49
FANCA-228ENST00000567943 ACTR10Q9NZ32 417 aa24.35■■□□□ 1.49
FANCA-228ENST00000567943 CROTQ9UKG9 612 aa24.35■■□□□ 1.49
FANCA-228ENST00000567943 ZNF891A8MT65 544 aaPredicted RBP24.34■■□□□ 1.49
FANCA-228ENST00000567943 C2orf74A8MZ97 194 aa24.34■■□□□ 1.49
FANCA-228ENST00000567943 SMAPO00193 183 aa24.34■■□□□ 1.49
FANCA-228ENST00000567943 SEC31AO94979 1220 aaKnown RBP24.34■■□□□ 1.49
FANCA-228ENST00000567943 NTRK1P04629 796 aa24.34■■□□□ 1.49
FANCA-228ENST00000567943 CHRM3P20309 590 aa24.34■■□□□ 1.49
FANCA-228ENST00000567943 DLSTP36957 453 aa24.34■■□□□ 1.49
FANCA-228ENST00000567943 SLC1A2P43004 574 aa24.34■■□□□ 1.49
FANCA-228ENST00000567943 HSP90AA5PQ58FG0 334 aa24.34■■□□□ 1.49
FANCA-228ENST00000567943 PLEKHS1Q5SXH7 462 aa24.34■■□□□ 1.49
FANCA-228ENST00000567943 PRAMEF17Q5VTA0 474 aa24.34■■□□□ 1.49
FANCA-228ENST00000567943 UNC5DQ6UXZ4 953 aa24.34■■□□□ 1.49
FANCA-228ENST00000567943 KCNMB4Q86W47 210 aa24.34■■□□□ 1.49
FANCA-228ENST00000567943 IGDCC3Q8IVU1 814 aa24.34■■□□□ 1.49
FANCA-228ENST00000567943 LMNTD2Q8IXW0 634 aa24.34■■□□□ 1.49
FANCA-228ENST00000567943 SLC38A9Q8NBW4 561 aa24.34■■□□□ 1.49
FANCA-228ENST00000567943 CALML6Q8TD86 181 aa24.34■■□□□ 1.49
FANCA-228ENST00000567943 SKA2Q8WVK7 121 aaPredicted RBP24.34■■□□□ 1.49
FANCA-228ENST00000567943 STARD8Q92502 1023 aa24.34■■□□□ 1.49
FANCA-228ENST00000567943 TRAPPC9Q96Q05 1148 aa24.34■■□□□ 1.49
FANCA-228ENST00000567943 MENTQ9BUN1 341 aa24.34■■□□□ 1.49
FANCA-228ENST00000567943 KLHL25Q9H0H3 589 aa24.34■■□□□ 1.49
FANCA-228ENST00000567943 SOHLH2Q9NX45 425 aa24.34■■□□□ 1.49
FANCA-228ENST00000567943 SEC16AO15027 2179 aa24.34■■□□□ 1.49
FANCA-228ENST00000567943 KDM1AO60341 852 aa24.33■■□□□ 1.49
FANCA-228ENST00000567943 TTC4O95801 387 aa24.33■■□□□ 1.49
FANCA-228ENST00000567943 RPN2P04844 631 aa24.33■■□□□ 1.49
FANCA-228ENST00000567943 PRKAR1AP10644 381 aa24.33■■□□□ 1.49
FANCA-228ENST00000567943 OAS2P29728 719 aaKnown RBP24.33■■□□□ 1.49
FANCA-228ENST00000567943 C2orf54Q08AI8 447 aa24.33■■□□□ 1.49
FANCA-228ENST00000567943 SPANXN3Q5MJ09 141 aa24.33■■□□□ 1.49
FANCA-228ENST00000567943 HP1BP3Q5SSJ5 553 aaPredicted RBP24.33■■□□□ 1.49
FANCA-228ENST00000567943 ATP1A1-AS1Q5TC04 95 aa24.33■■□□□ 1.49
FANCA-228ENST00000567943 CYB5D1Q6P9G0 228 aa24.33■■□□□ 1.49
FANCA-228ENST00000567943 OR2A14Q96R47 310 aa24.33■■□□□ 1.49
FANCA-228ENST00000567943 FAM167BQ9BTA0 163 aa24.33■■□□□ 1.49
FANCA-228ENST00000567943 NAT9Q9BTE0 207 aa24.33■■□□□ 1.49
FANCA-228ENST00000567943 EFHD1Q9BUP0 239 aa24.33■■□□□ 1.49
FANCA-228ENST00000567943 LHX9Q9NQ69 397 aa24.33■■□□□ 1.49
FANCA-228ENST00000567943 IARS2Q9NSE4 1012 aaKnown RBP24.33■■□□□ 1.49
FANCA-228ENST00000567943 GALPQ9UBC7 116 aa24.33■■□□□ 1.49
FANCA-228ENST00000567943 CIDEBQ9UHD4 219 aa24.33■■□□□ 1.49
FANCA-228ENST00000567943 TSR3Q9UJK0 312 aaKnown RBP24.33■■□□□ 1.49
FANCA-228ENST00000567943 FBXO5Q9UKT4 447 aa24.33■■□□□ 1.49
FANCA-228ENST00000567943 SNX24Q9Y343 169 aa24.33■■□□□ 1.49
FANCA-228ENST00000567943 PIPSLA2A3N6 862 aa24.32■■□□□ 1.48
FANCA-228ENST00000567943 E5RI56 91 aa24.32■■□□□ 1.48
FANCA-228ENST00000567943 PEBP1P30086 187 aaKnown RBP24.32■■□□□ 1.48
FANCA-228ENST00000567943 MPP1Q00013 466 aa24.32■■□□□ 1.48
FANCA-228ENST00000567943 CDC20Q12834 499 aa24.32■■□□□ 1.48
FANCA-228ENST00000567943 GRB7Q14451 532 aa24.32■■□□□ 1.48
FANCA-228ENST00000567943 HIF1AQ16665 826 aa24.32■■□□□ 1.48
FANCA-228ENST00000567943 SPESP1Q6UW49 350 aa24.32■■□□□ 1.48
FANCA-228ENST00000567943 TRIM73Q86UV7 250 aa24.32■■□□□ 1.48
FANCA-228ENST00000567943 DCUN1D3Q8IWE4 304 aa24.32■■□□□ 1.48
FANCA-228ENST00000567943 CT55Q8WUE5 264 aa24.32■■□□□ 1.48
FANCA-228ENST00000567943 RUFY1Q96T51 708 aa24.32■■□□□ 1.48
FANCA-228ENST00000567943 OR6C2Q9NZP2 312 aa24.32■■□□□ 1.48
FANCA-228ENST00000567943 PADI1Q9ULC6 663 aa24.32■■□□□ 1.48
FANCA-228ENST00000567943 CHMP2BQ9UQN3 213 aa24.32■■□□□ 1.48
FANCA-228ENST00000567943 RUVBL2Q9Y230 463 aaKnown RBP24.32■■□□□ 1.48
FANCA-228ENST00000567943 CHRM5P08912 532 aaPredicted RBP24.31■■□□□ 1.48
FANCA-228ENST00000567943 MSL3P1P0C860 447 aa24.31■■□□□ 1.48
FANCA-228ENST00000567943 ERVK-10P10266 1014 aa24.31■■□□□ 1.48
FANCA-228ENST00000567943 UGT2B7P16662 529 aa24.31■■□□□ 1.48
FANCA-228ENST00000567943 ELK3P41970 407 aa24.31■■□□□ 1.48
FANCA-228ENST00000567943 RPL21P46778 160 aaKnown RBP24.31■■□□□ 1.48
FANCA-228ENST00000567943 ZIC1Q15915 447 aa24.31■■□□□ 1.48
FANCA-228ENST00000567943 TMTC4Q5T4D3 741 aa24.31■■□□□ 1.48
FANCA-228ENST00000567943 FAM199XQ6PEV8 388 aaPredicted RBP24.31■■□□□ 1.48
FANCA-228ENST00000567943 ZBTB2Q8N680 514 aa24.31■■□□□ 1.48
FANCA-228ENST00000567943 LMNTD1Q8N9Z9 388 aa24.31■■□□□ 1.48
FANCA-228ENST00000567943 OR1L3Q8NH93 324 aa24.31■■□□□ 1.48
FANCA-228ENST00000567943 CFAP36Q96G28 342 aa24.31■■□□□ 1.48
FANCA-228ENST00000567943 C16orf45Q96MC5 204 aaPredicted RBP24.31■■□□□ 1.48
FANCA-228ENST00000567943 CCDC68Q9H2F9 335 aa24.31■■□□□ 1.48
FANCA-228ENST00000567943 FAM60AQ9NP50 221 aa24.31■■□□□ 1.48
FANCA-228ENST00000567943 LATS2Q9NRM7 1088 aa24.31■■□□□ 1.48
FANCA-228ENST00000567943 NFS1Q9Y697 457 aa24.31■■□□□ 1.48
FANCA-228ENST00000567943 FER1L5A0AVI2 2057 aa24.31■■□□□ 1.48
FANCA-228ENST00000567943 FAM187AA6NFU0 413 aa24.3■■□□□ 1.48
FANCA-228ENST00000567943 TP73O15350 636 aa24.3■■□□□ 1.48
FANCA-228ENST00000567943 HCRTR1O43613 425 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms