RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 PCDH10Q9P2E7 1040 aa12.17□□□□□ -0.46
CSPG4P13-202ENST00000567704 DNMT3LQ9UJW3 386 aa12.17□□□□□ -0.46
CSPG4P13-202ENST00000567704 ARL5AQ9Y689 179 aa12.17□□□□□ -0.46
CSPG4P13-202ENST00000567704 CPSF4LA6NMK7 179 aaKnown RBP12.17□□□□□ -0.46
CSPG4P13-202ENST00000567704 CAPN14A8MX76 684 aa12.17□□□□□ -0.46
CSPG4P13-202ENST00000567704 GABRDO14764 452 aa12.17□□□□□ -0.46
CSPG4P13-202ENST00000567704 MT-ND2P03891 347 aa12.17□□□□□ -0.46
CSPG4P13-202ENST00000567704 DHRS4L1P0CG22 281 aa12.17□□□□□ -0.46
CSPG4P13-202ENST00000567704 MYF6P23409 242 aa12.17□□□□□ -0.46
CSPG4P13-202ENST00000567704 PTX3P26022 381 aaPredicted RBP12.17□□□□□ -0.46
CSPG4P13-202ENST00000567704 ELAVL2Q12926 359 aaKnown RBP12.17□□□□□ -0.46
CSPG4P13-202ENST00000567704 NAE1Q13564 534 aa12.17□□□□□ -0.46
CSPG4P13-202ENST00000567704 ZNF181Q2M3W8 571 aa12.17□□□□□ -0.46
CSPG4P13-202ENST00000567704 FBXL19Q6PCT2 694 aa12.17□□□□□ -0.46
CSPG4P13-202ENST00000567704 TMPRSS11BQ86T26 416 aa12.17□□□□□ -0.46
CSPG4P13-202ENST00000567704 YAF2Q8IY57 180 aa12.17□□□□□ -0.46
CSPG4P13-202ENST00000567704 AKAP1Q92667 903 aaKnown RBP eCLIP12.17□□□□□ -0.46
CSPG4P13-202ENST00000567704 PYURFQ96I23 114 aa12.17□□□□□ -0.46
CSPG4P13-202ENST00000567704 RHBGQ9H310 441 aa12.17□□□□□ -0.46
CSPG4P13-202ENST00000567704 PIGVQ9NUD9 493 aa12.17□□□□□ -0.46
CSPG4P13-202ENST00000567704 CCNDBP1O95273 360 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 MATN1P21941 496 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 AP2S1P53680 142 aaPredicted RBP12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 BEX3Q00994 111 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 CMTR2Q8IYT2 770 aaKnown RBP12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 CHPFQ8IZ52 775 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 C7orf57Q8NEG2 295 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 MNTQ99583 582 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 LHPPQ9H008 270 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 NUP50Q9UKX7 468 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 MYH7P12883 1935 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 NRCAMQ92823 1304 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 NIPSNAP2O75323 286 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 IL1BP01584 269 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 OGNP20774 298 aaKnown RBP12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 RFC2P35250 354 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 NCS1P62166 190 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 PLD1Q13393 1074 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 HECTD3Q5T447 861 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 KIAA1614Q5VZ46 1190 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 CERS6Q6ZMG9 384 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 ANKRD60Q9BZ19 345 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 RACGAP1Q9H0H5 632 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 KCNN2Q9H2S1 579 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 CTPS2Q9NRF8 586 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 MOCS1Q9NZB8 636 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 PRKAG2Q9UGJ0 569 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 TBL1XO60907 577 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 ITGA3P26006 1051 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 MNDAP41218 407 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 SRSF11Q05519 484 aaKnown RBP12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 MBTD1Q05BQ5 628 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 TARDBPQ13148 414 aaKnown RBP eCLIP12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 RAPSNQ13702 412 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 FCRL3Q96P31 734 aaPredicted RBP12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 PIGUQ9H490 435 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 THUMPD1Q9NXG2 353 aaKnown RBP12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 RIMKLBQ9ULI2 386 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 NCKAP1Q9Y2A7 1128 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 A0A1W2PQ67 120 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 KLRG2A4D1S0 409 aaPredicted RBP12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 FAM86C2PA6NEL3 165 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 CDC7O00311 574 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 IFNA16P05015 189 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 HLA-DQB2P05538 268 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 CXCR2P25025 360 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 PBX3P40426 434 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 ARL4DP49703 201 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 PPP5CP53041 499 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 SNRPD1P62314 119 aaKnown RBP12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 POM121L1PQ3SYA9 428 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 CES5AQ6NT32 575 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 NAPRTQ6XQN6 538 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 SLC38A4Q969I6 547 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 BTN2A3PQ96KV6 586 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 RDH12Q96NR8 316 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 HAPLN3Q96S86 360 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 NMUR1Q9HB89 426 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 KANSL3Q9P2N6 904 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 FBXO9Q9UK97 447 aaPredicted RBP12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 TRPV2Q9Y5S1 764 aa12.16□□□□□ -0.46
CSPG4P13-202ENST00000567704 PARP4Q9UKK3 1724 aaKnown RBP12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 ATRNL1Q5VV63 1379 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 MYBPHLA2RUH7 354 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 OR14I1A6ND48 311 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 C7P10643 843 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 ENGP17813 658 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 PARP15Q460N3 678 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 SPANXN4Q5MJ08 99 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 UBE2UQ5VVX9 321 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 PEG10Q86TG7 708 aaKnown RBP12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 CIR1Q86X95 450 aaPredicted RBP12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 GLYATL1P3A0A0U1RQE8 302 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 OR2B3O76000 313 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 PCDH8O95206 1070 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 SMIM10L2AP0DMW4 78 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 SMIM10L2BP0DMW5 78 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 CACNG1Q06432 222 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 BIKQ13323 160 aa12.15□□□□□ -0.46
CSPG4P13-202ENST00000567704 UGT8Q16880 541 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms