RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 GPR149Q86SP6 731 aa16.39■□□□□ 0.21
CMTM3-213ENST00000566756 PLPP6Q8IY26 295 aa16.39■□□□□ 0.21
CMTM3-213ENST00000566756 ZNF555Q8NEP9 628 aa16.39■□□□□ 0.21
CMTM3-213ENST00000566756 PIH1D2Q8WWB5 315 aa16.39■□□□□ 0.21
CMTM3-213ENST00000566756 RHBDF1Q96CC6 855 aa16.39■□□□□ 0.21
CMTM3-213ENST00000566756 DCUN1D5Q9BTE7 237 aa16.39■□□□□ 0.21
CMTM3-213ENST00000566756 SOX17Q9H6I2 414 aaPredicted RBP16.39■□□□□ 0.21
CMTM3-213ENST00000566756 ASAH2Q9NR71 780 aa16.39■□□□□ 0.21
CMTM3-213ENST00000566756 FAM118AQ9NWS6 357 aa16.39■□□□□ 0.21
CMTM3-213ENST00000566756 ADGRE2Q9UHX3 823 aa16.39■□□□□ 0.21
CMTM3-213ENST00000566756 LSM7Q9UK45 103 aaKnown RBP16.39■□□□□ 0.21
CMTM3-213ENST00000566756 OR51B4Q9Y5P0 310 aa16.39■□□□□ 0.21
CMTM3-213ENST00000566756 V9GYQ6 96 aa16.39■□□□□ 0.21
CMTM3-213ENST00000566756 TRAV19A0A0A6YYK7 116 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 ULK1O75385 1050 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 PRAMEF1O95521 474 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 PGRP06401 933 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 CBSLP0DN79 551 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 TCF3P15923 654 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 HOXA9P31269 272 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 SHMT2P34897 504 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 CBSP35520 551 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 MAPK8P45983 427 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 CSNK1DP48730 415 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 PTPN5P54829 565 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 CYP4F8P98187 520 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 NFATC3Q12968 1075 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 NFATC2Q13469 925 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 IL18R1Q13478 541 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 C16orf72Q14CZ0 275 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 C18orf21Q32NC0 220 aaPredicted RBP16.38■□□□□ 0.21
CMTM3-213ENST00000566756 RFX4Q33E94 735 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 PLA2G4EQ3MJ16 856 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 GPR33Q49SQ1 333 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 GPRC6AQ5T6X5 926 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 ADHFE1Q8IWW8 467 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 CBARPQ8N350 705 aaPredicted RBP16.38■□□□□ 0.21
CMTM3-213ENST00000566756 ZBTB2Q8N680 514 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 SMYD1Q8NB12 490 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 SLC47A1Q96FL8 570 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 TOR3AQ9H497 397 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 LRTM1Q9HBL6 345 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.38■□□□□ 0.21
CMTM3-213ENST00000566756 MAN2B2Q9Y2E5 1009 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 A0A1W2PPW3 197 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 SOBPA7XYQ1 873 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 EIF3FO00303 357 aaPredicted RBP16.38■□□□□ 0.21
CMTM3-213ENST00000566756 CST1P01037 141 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 ZNF12P17014 697 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 ACRV1P26436 265 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 ELK4P28324 431 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 SOX11P35716 441 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 TMED1Q13445 227 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 NEDD8Q15843 81 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 TTLL9Q3SXZ7 439 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 FAM174BQ3ZCQ3 159 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 ZC3H12BQ5HYM0 836 aaKnown RBP16.38■□□□□ 0.21
CMTM3-213ENST00000566756 LRIF1Q5T3J3 769 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 XAF1Q6GPH4 301 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 CALHM3Q86XJ0 350 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 MICU2Q8IYU8 434 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 CPXM2Q8N436 756 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 DCAF4L2Q8NA75 395 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 HJURPQ8NCD3 748 aaPredicted RBP16.38■□□□□ 0.21
CMTM3-213ENST00000566756 OR5K1Q8NHB7 308 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 FIG4Q92562 907 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 TBC1D20Q96BZ9 403 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 PHF12Q96QT6 1004 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 THUMPD3Q9BV44 507 aaKnown RBP16.38■□□□□ 0.21
CMTM3-213ENST00000566756 ACTR8Q9H981 624 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 ZFYVE1Q9HBF4 777 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 DCAF13Q9NV06 445 aaKnown RBP16.38■□□□□ 0.21
CMTM3-213ENST00000566756 WWOXQ9NZC7 414 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 C3orf18Q9UK00 162 aa16.38■□□□□ 0.21
CMTM3-213ENST00000566756 H0Y626 953 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 CXCR6O00574 342 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 TSPAN3O60637 253 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 SOCS5O75159 536 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 CKMP06732 381 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 EEF1B2P24534 225 aaKnown RBP16.37■□□□□ 0.21
CMTM3-213ENST00000566756 DDX6P26196 483 aaKnown RBP eCLIP16.37■□□□□ 0.21
CMTM3-213ENST00000566756 POLR2IP36954 125 aaKnown RBP16.37■□□□□ 0.21
CMTM3-213ENST00000566756 CAMK1Q14012 370 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 ZIK1Q3SY52 487 aaPredicted RBP16.37■□□□□ 0.21
CMTM3-213ENST00000566756 FGD3Q5JSP0 725 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 PDE12Q6L8Q7 609 aaKnown RBP16.37■□□□□ 0.21
CMTM3-213ENST00000566756 ANKRD26P1Q6NSI1 321 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 LINGO4Q6UY18 593 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 MSRB3Q8IXL7 192 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 OR10A6Q8NH74 314 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 ACDQ96AP0 544 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 HSPBAP1Q96EW2 488 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 SAMD11Q96NU1 681 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 MBOAT4Q96T53 435 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 EGFL8Q99944 293 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 CORO1BQ9BR76 489 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 KCNH6Q9H252 994 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 ASB8Q9H765 288 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 CARS2Q9HA77 564 aaKnown RBP16.37■□□□□ 0.21
CMTM3-213ENST00000566756 C1orf109Q9NX04 203 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms