RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 LINGO1Q96FE5 620 aa25.32■■□□□ 1.64
NME3-209ENST00000566600 GPR22Q99680 433 aa25.32■■□□□ 1.64
NME3-209ENST00000566600 SPATA7Q9P0W8 599 aa25.32■■□□□ 1.64
NME3-209ENST00000566600 MTO1Q9Y2Z2 717 aaKnown RBP25.32■■□□□ 1.64
NME3-209ENST00000566600 CHD8Q9HCK8 2581 aa25.32■■□□□ 1.64
NME3-209ENST00000566600 ARHGEF33A8MVX0 844 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 C1QTNF9BB2RNN3 333 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 KIF1CO43896 1103 aaKnown RBP25.31■■□□□ 1.64
NME3-209ENST00000566600 BRINP1O60477 761 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 TNFSF15O95150 251 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 C8GP07360 202 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 ITGA2BP08514 1039 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 C1QTNF9P0C862 333 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 PRDX3P30048 256 aaKnown RBP25.31■■□□□ 1.64
NME3-209ENST00000566600 HSD17B2P37059 387 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 KPNA2P52292 529 aaKnown RBP25.31■■□□□ 1.64
NME3-209ENST00000566600 TAS2R39P59534 338 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 CYP4F3Q08477 520 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 SP140Q13342 867 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 KIR2DS3Q14952 304 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 NKAPQ8N5F7 415 aaKnown RBP25.31■■□□□ 1.64
NME3-209ENST00000566600 OR9A1PQ8NGU1 263 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 KLHL6Q8WZ60 621 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 SLC22A18Q96BI1 424 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 PDLIM5Q96HC4 596 aaKnown RBP25.31■■□□□ 1.64
NME3-209ENST00000566600 PRR11Q96HE9 360 aaPredicted RBP25.31■■□□□ 1.64
NME3-209ENST00000566600 SLC46A1Q96NT5 459 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 MAP3K3Q99759 626 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 MENTQ9BUN1 341 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 C1GALT1Q9NS00 363 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 ACTR10Q9NZ32 417 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 PISDQ9UG56 409 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 KIF26BQ2KJY2 2108 aa25.31■■□□□ 1.64
NME3-209ENST00000566600 A0A087WUV0 522 aaPredicted RBP25.3■■□□□ 1.64
NME3-209ENST00000566600 B4E171 279 aa25.3■■□□□ 1.64
NME3-209ENST00000566600 MYO1CO00159 1063 aa25.3■■□□□ 1.64
NME3-209ENST00000566600 SLC16A5O15375 505 aa25.3■■□□□ 1.64
NME3-209ENST00000566600 HGFP14210 728 aa25.3■■□□□ 1.64
NME3-209ENST00000566600 TSPAN7P41732 249 aa25.3■■□□□ 1.64
NME3-209ENST00000566600 ARL4DP49703 201 aa25.3■■□□□ 1.64
NME3-209ENST00000566600 USP10Q14694 798 aaKnown RBP25.3■■□□□ 1.64
NME3-209ENST00000566600 ANKS6Q68DC2 871 aa25.3■■□□□ 1.64
NME3-209ENST00000566600 UBE2R2Q712K3 238 aaPredicted RBP25.3■■□□□ 1.64
NME3-209ENST00000566600 FAM129CQ86XR2 697 aa25.3■■□□□ 1.64
NME3-209ENST00000566600 RASGRP3Q8IV61 690 aa25.3■■□□□ 1.64
NME3-209ENST00000566600 ZNF578Q96N58 590 aaPredicted RBP25.3■■□□□ 1.64
NME3-209ENST00000566600 NRTNQ99748 197 aa25.3■■□□□ 1.64
NME3-209ENST00000566600 B3GNT4Q9C0J1 378 aa25.3■■□□□ 1.64
NME3-209ENST00000566600 THSD1Q9NS62 852 aa25.3■■□□□ 1.64
NME3-209ENST00000566600 ZNF839A8K0R7 811 aa25.29■■□□□ 1.64
NME3-209ENST00000566600 EFCAB7A8K855 629 aa25.29■■□□□ 1.64
NME3-209ENST00000566600 AGRPO00253 132 aa25.29■■□□□ 1.64
NME3-209ENST00000566600 ZBTB11O95625 1053 aaPredicted RBP25.29■■□□□ 1.64
NME3-209ENST00000566600 ABHD2P08910 425 aa25.29■■□□□ 1.64
NME3-209ENST00000566600 ZNF37AP17032 561 aaPredicted RBP25.29■■□□□ 1.64
NME3-209ENST00000566600 CYP2A7P20853 494 aa25.29■■□□□ 1.64
NME3-209ENST00000566600 CDH3P22223 829 aa25.29■■□□□ 1.64
NME3-209ENST00000566600 SEPHS1P49903 392 aa25.29■■□□□ 1.64
NME3-209ENST00000566600 PMS2P54278 862 aa25.29■■□□□ 1.64
NME3-209ENST00000566600 ERVPABLB-1P60509 514 aa25.29■■□□□ 1.64
NME3-209ENST00000566600 ARHGAP19Q14CB8 494 aa25.29■■□□□ 1.64
NME3-209ENST00000566600 EFTUD2Q15029 972 aaKnown RBP eCLIP25.29■■□□□ 1.646e-11■■■■■ 32.6
NME3-209ENST00000566600 CCSMST1Q4G0I0 132 aa25.29■■□□□ 1.64
NME3-209ENST00000566600 EEF1AKMT2Q5JPI9 291 aaKnown RBP25.29■■□□□ 1.64
NME3-209ENST00000566600 TMEM164Q5U3C3 297 aa25.29■■□□□ 1.64
NME3-209ENST00000566600 CYB5D1Q6P9G0 228 aa25.29■■□□□ 1.64
NME3-209ENST00000566600 HMGCLL1Q8TB92 370 aa25.29■■□□□ 1.64
NME3-209ENST00000566600 MCOLN3Q8TDD5 553 aa25.29■■□□□ 1.64
NME3-209ENST00000566600 TWSG1Q9GZX9 223 aa25.29■■□□□ 1.64
NME3-209ENST00000566600 ANKZF1Q9H8Y5 726 aa25.29■■□□□ 1.64
NME3-209ENST00000566600 GPAMQ9HCL2 828 aa25.29■■□□□ 1.64
NME3-209ENST00000566600 CIDEBQ9UHD4 219 aa25.29■■□□□ 1.64
NME3-209ENST00000566600 IGHV5-51A0A0C4DH38 117 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 PMS2P1A4D2B8 440 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 ISM1B1AKI9 464 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 MAP3K7O43318 606 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 TSPAN12O95859 305 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 FAM153BP0C7A2 387 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 FGF3P11487 239 aaPredicted RBP25.28■■□□□ 1.64
NME3-209ENST00000566600 CCL4P13236 92 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 STMN1P16949 149 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 NELFEP18615 380 aaKnown RBP25.28■■□□□ 1.64
NME3-209ENST00000566600 ITIH1P19827 911 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 MAPK10P53779 464 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 RAB15P59190 212 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 FAM153CQ494X1 144 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 SPESP1Q6UW49 350 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 LINC01555Q8NAE3 123 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 MDM1Q8TC05 714 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 ANKRD7Q92527 254 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 SLC41A2Q96JW4 573 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 IL17FQ96PD4 163 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 TAAR9Q96RI9 348 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 SLC12A9Q9BXP2 914 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 PITPNM3Q9BZ71 974 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 ASCL3Q9NQ33 180 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 FBXO8Q9NRD0 319 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 OCIAD1Q9NX40 245 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 PCDHGA7Q9Y5G6 932 aa25.28■■□□□ 1.64
NME3-209ENST00000566600 IKBKGQ9Y6K9 419 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms