RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 CCL7P80098 99 aa25.22■■□□□ 1.63
NME3-208ENST00000565379 SP140Q13342 867 aa25.22■■□□□ 1.63
NME3-208ENST00000565379 CYHR1Q6ZMK1 362 aa25.22■■□□□ 1.63
NME3-208ENST00000565379 TMEM26Q6ZUK4 368 aa25.22■■□□□ 1.63
NME3-208ENST00000565379 FGF11Q92914 225 aa25.22■■□□□ 1.63
NME3-208ENST00000565379 NAF1Q96HR8 494 aaKnown RBP25.22■■□□□ 1.63
NME3-208ENST00000565379 CABS1Q96KC9 395 aa25.22■■□□□ 1.63
NME3-208ENST00000565379 UBL7Q96S82 380 aaPredicted RBP25.22■■□□□ 1.63
NME3-208ENST00000565379 SLC38A3Q99624 504 aa25.22■■□□□ 1.63
NME3-208ENST00000565379 EPB41L1Q9H4G0 881 aa25.22■■□□□ 1.63
NME3-208ENST00000565379 KIR3DX1Q9H7L2 352 aa25.22■■□□□ 1.63
NME3-208ENST00000565379 SNX15Q9NRS6 342 aa25.22■■□□□ 1.63
NME3-208ENST00000565379 PLAAQ9Y263 795 aa25.22■■□□□ 1.63
NME3-208ENST00000565379 ACOT9Q9Y305 439 aa25.22■■□□□ 1.63
NME3-208ENST00000565379 A0A1W2PQM1 296 aa25.21■■□□□ 1.63
NME3-208ENST00000565379 TRIM49D1C9J1S8 452 aa25.21■■□□□ 1.63
NME3-208ENST00000565379 PPM1DO15297 605 aa25.21■■□□□ 1.63
NME3-208ENST00000565379 CATP04040 527 aaKnown RBP25.21■■□□□ 1.63
NME3-208ENST00000565379 DCUN1D3Q8IWE4 304 aa25.21■■□□□ 1.63
NME3-208ENST00000565379 FBXO15Q8NCQ5 510 aaPredicted RBP25.21■■□□□ 1.63
NME3-208ENST00000565379 WDR48Q8TAF3 677 aa25.21■■□□□ 1.63
NME3-208ENST00000565379 ASB11Q8WXH4 323 aa25.21■■□□□ 1.63
NME3-208ENST00000565379 POLR1BQ9H9Y6 1135 aa25.21■■□□□ 1.63
NME3-208ENST00000565379 ASCL3Q9NQ33 180 aa25.21■■□□□ 1.63
NME3-208ENST00000565379 CFAP20Q9Y6A4 193 aaKnown RBP25.21■■□□□ 1.63
NME3-208ENST00000565379 UNC13CQ8NB66 2214 aa25.2■■□□□ 1.62
NME3-208ENST00000565379 CCDC189A1A4V9 331 aa25.2■■□□□ 1.62
NME3-208ENST00000565379 NTN3O00634 580 aaPredicted RBP25.2■■□□□ 1.62
NME3-208ENST00000565379 ZBTB14O43829 449 aa25.2■■□□□ 1.62
NME3-208ENST00000565379 PSIP1O75475 530 aaKnown RBP25.2■■□□□ 1.62
NME3-208ENST00000565379 TSPAN12O95859 305 aa25.2■■□□□ 1.62
NME3-208ENST00000565379 MAGEA12P43365 314 aa25.2■■□□□ 1.62
NME3-208ENST00000565379 CSRP3P50461 194 aa25.2■■□□□ 1.62
NME3-208ENST00000565379 ATP6V0D1P61421 351 aa25.2■■□□□ 1.62
NME3-208ENST00000565379 TMEM207Q6UWW9 146 aa25.2■■□□□ 1.62
NME3-208ENST00000565379 TBC1D1Q86TI0 1168 aaPredicted RBP25.2■■□□□ 1.62
NME3-208ENST00000565379 IQCKQ8N0W5 287 aa25.2■■□□□ 1.62
NME3-208ENST00000565379 Q8N9G6 341 aaPredicted RBP25.2■■□□□ 1.62
NME3-208ENST00000565379 CFAP61Q8NHU2 1237 aa25.2■■□□□ 1.62
NME3-208ENST00000565379 RAD51AP1Q96B01 352 aa25.2■■□□□ 1.62
NME3-208ENST00000565379 PRR11Q96HE9 360 aaPredicted RBP25.2■■□□□ 1.62
NME3-208ENST00000565379 UBXN10Q96LJ8 280 aa25.2■■□□□ 1.62
NME3-208ENST00000565379 DERL2Q9GZP9 239 aa25.2■■□□□ 1.62
NME3-208ENST00000565379 PRORYQ9H606 182 aa25.2■■□□□ 1.62
NME3-208ENST00000565379 GFYI3L273 518 aa25.19■■□□□ 1.62
NME3-208ENST00000565379 AGRPO00253 132 aa25.19■■□□□ 1.62
NME3-208ENST00000565379 PHGDHO43175 533 aaKnown RBP25.19■■□□□ 1.62
NME3-208ENST00000565379 C1orf105O95561 183 aa25.19■■□□□ 1.62
NME3-208ENST00000565379 ALDOAP04075 364 aaKnown RBP25.19■■□□□ 1.62
NME3-208ENST00000565379 RPLP0P05388 317 aaKnown RBP25.19■■□□□ 1.62
NME3-208ENST00000565379 SLC35E2BP0CK96 405 aa25.19■■□□□ 1.62
NME3-208ENST00000565379 H2AFXP16104 143 aaPredicted RBP25.19■■□□□ 1.62
NME3-208ENST00000565379 MAP4P27816 1152 aaKnown RBP25.19■■□□□ 1.62
NME3-208ENST00000565379 LSSP48449 732 aa25.19■■□□□ 1.62
NME3-208ENST00000565379 GPLD1P80108 840 aa25.19■■□□□ 1.62
NME3-208ENST00000565379 ZNF460Q14592 562 aa25.19■■□□□ 1.62
NME3-208ENST00000565379 CLPPQ16740 277 aaPredicted RBP25.19■■□□□ 1.62
NME3-208ENST00000565379 FOXR1Q6PIV2 292 aa25.19■■□□□ 1.62
NME3-208ENST00000565379 LRIG3Q6UXM1 1119 aa25.19■■□□□ 1.62
NME3-208ENST00000565379 PIWIL4Q7Z3Z4 852 aaKnown RBP25.19■■□□□ 1.62
NME3-208ENST00000565379 CMC1Q7Z7K0 106 aa25.19■■□□□ 1.62
NME3-208ENST00000565379 RASGRP3Q8IV61 690 aa25.19■■□□□ 1.62
NME3-208ENST00000565379 RAB42Q8N4Z0 105 aa25.19■■□□□ 1.62
NME3-208ENST00000565379 PHC3Q8NDX5 983 aa25.19■■□□□ 1.62
NME3-208ENST00000565379 OR5AR1Q8NGP9 310 aa25.19■■□□□ 1.62
NME3-208ENST00000565379 ACMSDQ8TDX5 336 aa25.19■■□□□ 1.62
NME3-208ENST00000565379 EPS8L3Q8TE67 593 aaKnown RBP25.19■■□□□ 1.62
NME3-208ENST00000565379 TFB2MQ9H5Q4 396 aaKnown RBP25.19■■□□□ 1.62
NME3-208ENST00000565379 A0A096LPK6 155 aa25.18■■□□□ 1.62
NME3-208ENST00000565379 C2P06681 752 aa25.18■■□□□ 1.62
NME3-208ENST00000565379 ENO2P09104 434 aaPredicted RBP25.18■■□□□ 1.62
NME3-208ENST00000565379 CCDC166P0CW27 439 aa25.18■■□□□ 1.62
NME3-208ENST00000565379 COL6A2P12110 1019 aa25.18■■□□□ 1.62
NME3-208ENST00000565379 CYP2A7P20853 494 aa25.18■■□□□ 1.62
NME3-208ENST00000565379 SPIDRQ14159 915 aa25.18■■□□□ 1.62
NME3-208ENST00000565379 GPR18Q14330 331 aa25.18■■□□□ 1.62
NME3-208ENST00000565379 DUS1LQ6P1R4 473 aaKnown RBP25.18■■□□□ 1.62
NME3-208ENST00000565379 KLHL35Q6PF15 583 aa25.18■■□□□ 1.62
NME3-208ENST00000565379 OR2W6PQ8NHA6 318 aa25.18■■□□□ 1.62
NME3-208ENST00000565379 RAB11FIP5Q9BXF6 653 aa25.18■■□□□ 1.62
NME3-208ENST00000565379 SLC12A9Q9BXP2 914 aa25.18■■□□□ 1.62
NME3-208ENST00000565379 KCNK4Q9NYG8 393 aa25.18■■□□□ 1.62
NME3-208ENST00000565379 EURLQ9NYK6 297 aa25.18■■□□□ 1.62
NME3-208ENST00000565379 ATXN7L1Q9ULK2 861 aaPredicted RBP25.18■■□□□ 1.62
NME3-208ENST00000565379 NOVA2Q9UNW9 492 aaKnown RBP25.18■■□□□ 1.62
NME3-208ENST00000565379 NFS1Q9Y697 457 aa25.18■■□□□ 1.62
NME3-208ENST00000565379 PABPN1LA6NDY0 278 aaKnown RBP25.17■■□□□ 1.62
NME3-208ENST00000565379 TK2O00142 265 aa25.17■■□□□ 1.62
NME3-208ENST00000565379 LTA4HP09960 611 aaKnown RBP25.17■■□□□ 1.62
NME3-208ENST00000565379 SLCO1A2P46721 670 aa25.17■■□□□ 1.62
NME3-208ENST00000565379 PLCL1Q15111 1095 aa25.17■■□□□ 1.62
NME3-208ENST00000565379 FAM83EQ2M2I3 478 aa25.17■■□□□ 1.62
NME3-208ENST00000565379 UBE2R2Q712K3 238 aaPredicted RBP25.17■■□□□ 1.62
NME3-208ENST00000565379 LCA5Q86VQ0 697 aa25.17■■□□□ 1.62
NME3-208ENST00000565379 SPACA3Q8IXA5 215 aa25.17■■□□□ 1.62
NME3-208ENST00000565379 OR10G6Q8NH81 332 aa25.17■■□□□ 1.62
NME3-208ENST00000565379 MCOLN3Q8TDD5 553 aa25.17■■□□□ 1.62
NME3-208ENST00000565379 ANKRD49Q8WVL7 239 aa25.17■■□□□ 1.62
NME3-208ENST00000565379 TRIM54Q9BYV2 358 aa25.17■■□□□ 1.62
NME3-208ENST00000565379 PARVBQ9HBI1 364 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms