RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 GDF5P43026 501 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 MAD2L1Q13257 205 aaPredicted RBP15.15■□□□□ 0.02
COMMD4-210ENST00000564587 NUMA1Q14980 2115 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 RPS6KA2Q15349 733 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 ATP6AP1LQ52LC2 224 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 LIPJQ5W064 366 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 METRNLQ641Q3 311 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 TMEM198Q66K66 360 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 IL27RAQ6UWB1 636 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 MBOAT1Q6ZNC8 495 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 C10orf67Q8IYJ2 551 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 L3MBTL4Q8NA19 623 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 RBM15BQ8NDT2 890 aaKnown RBP15.15■□□□□ 0.02
COMMD4-210ENST00000564587 OR9A1PQ8NGU1 263 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 OR56A3Q8NH54 315 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 TSPEARQ8WU66 669 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 C3orf30Q96M34 536 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 LGR4Q9BXB1 951 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 SLC6A17Q9H1V8 727 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 OR52A5Q9H2C5 316 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 EFCAB1Q9HAE3 211 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 USP36Q9P275 1121 aaKnown RBP15.15■□□□□ 0.02
COMMD4-210ENST00000564587 STOX2Q9P2F5 926 aaPredicted RBP15.15■□□□□ 0.02
COMMD4-210ENST00000564587 WNT16Q9UBV4 365 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 ZNHIT2Q9UHR6 403 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 G3BP2Q9UN86 482 aaKnown RBP15.15■□□□□ 0.02
COMMD4-210ENST00000564587 BTRCQ9Y297 605 aa15.15■□□□□ 0.02
COMMD4-210ENST00000564587 BPTFQ12830 3046 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 A0A1B0GTL3 188 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 ATP6AP2A0A1C7CYW4 349 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 SERTM1A2A2V5 107 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 CLGNO14967 610 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 ATP6AP2O75787 350 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 KRT16P08779 473 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 HNRNPA2B1P22626 353 aaKnown RBP15.14■□□□□ 0.01
COMMD4-210ENST00000564587 AKT2P31751 481 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 CCR5P51681 352 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 PNLIPRP1P54315 467 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 YPEL5P62699 121 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 ERVK-8P63133 956 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 ELF3P78545 371 aaPredicted RBP15.14■□□□□ 0.01
COMMD4-210ENST00000564587 RIPK1Q13546 671 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 PTK2BQ14289 1009 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 FASTKQ14296 549 aaKnown RBP15.14■□□□□ 0.01
COMMD4-210ENST00000564587 NFE2L1Q14494 772 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 ARHGAP19Q14CB8 494 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.14■□□□□ 0.01
COMMD4-210ENST00000564587 C10orf62Q5T681 223 aaPredicted RBP15.14■□□□□ 0.01
COMMD4-210ENST00000564587 IER5LQ5T953 404 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 CAPN13Q6MZZ7 669 aaPredicted RBP15.14■□□□□ 0.01
COMMD4-210ENST00000564587 C16orf89Q6UX73 402 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 LPCAT2Q7L5N7 544 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 TRIM46Q7Z4K8 759 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 GALNT13Q8IUC8 556 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 DCUN1D3Q8IWE4 304 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 MIER2Q8N344 545 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 LILRA3Q8N6C8 439 aaPredicted RBP15.14■□□□□ 0.01
COMMD4-210ENST00000564587 KLK6Q92876 244 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 SCARF2Q96GP6 870 aaPredicted RBP15.14■□□□□ 0.01
COMMD4-210ENST00000564587 CDK15Q96Q40 435 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 UHRF1Q96T88 793 aaPredicted RBP15.14■□□□□ 0.01
COMMD4-210ENST00000564587 PKP4Q99569 1192 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 SLC25A23Q9BV35 468 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 CADM1Q9BY67 442 aaKnown RBP15.14■□□□□ 0.01
COMMD4-210ENST00000564587 SLC22A14Q9Y267 594 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 OR1A2Q9Y585 309 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 HS3ST3A1Q9Y663 406 aa15.14■□□□□ 0.01
COMMD4-210ENST00000564587 LOC100653049A0A140TA62 436 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 BBIP1A8MTZ0 92 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 SLC31A1O15431 190 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 KRT34O76011 436 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 APBB3O95704 486 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 SLC35G4P0C7Q5 338 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 HTR1BP28222 390 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 HOXD11P31277 338 aaPredicted RBP15.13■□□□□ 0.01
COMMD4-210ENST00000564587 PGM1P36871 562 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 HNF4AP41235 474 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 BDKRB1P46663 353 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 CPA2P48052 419 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 PFN3P60673 137 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 EMX2Q04743 252 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 NAE1Q13564 534 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 KIF19Q2TAC6 998 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 C6orf163Q5TEZ5 329 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 CYB5D1Q6P9G0 228 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 FAM124AQ86V42 546 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 THOC6Q86W42 341 aaKnown RBP15.13■□□□□ 0.01
COMMD4-210ENST00000564587 SNX32Q86XE0 403 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 FAM9CQ8IZT9 166 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 PGBD3Q8N328 593 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 RAB42Q8N4Z0 105 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 KYQ8NBH2 561 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 FAM174AQ8TBP5 190 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 SETD7Q8WTS6 366 aaKnown RBP15.13■□□□□ 0.01
COMMD4-210ENST00000564587 HMGB4Q8WW32 186 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 USP7Q93009 1102 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 MIPEPQ99797 713 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 ZDHHC5Q9C0B5 715 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 LMAN1LQ9HAT1 526 aa15.13■□□□□ 0.01
COMMD4-210ENST00000564587 PRDM4Q9UKN5 801 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms